Pseudomonas stutzeri A1501, PST_2169 (oprN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCTCCTGGCCTTCCTGGTGCTGGCAGCGCAGTACGAAAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACGCTGCTCTCGGCCATCA CCGGAGTGATCCTGGCCGGTAGCGACAACAACGTCTTCACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCGTGCAAGAACGCGATCCTGATCGTCGA GTTCGCCAAGGACAAGCAGGAGGAAGGCATGGACCGGCTCGCCGCCACCCTGGAGGCCTGCCGCCTGCGCCTGCGGCCGATCCTGATGACCAGCTTCGCC TTCATCATGGGCGTGGTACCGCTGGTGCTTTCCAGCGGGGCCGGCGCCGAGATGCGCCATGCCATGGGCGTGGCGGTGTTCTCCGGGATGCTCGGGGTGA CCTTCTTCGGGCTGCTGCTGACCCCGGTGTTCTATCTGGTGATTCGCGCCTTCGTCGAGAAACGCGAAGCGCGCAAAGCGGTATTCAAGGAGGCCCGCGC
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| DNA Sequence for Gene |
>PST_2169
|oprN
ATGAAGTTCTTCGCCCTTTCCCTGCTCGCCCTGACCATCACCGGTTGCGCCGTCGGCCCGGATTACCGCGCGCCGCAACCGGAACCGGCGCGGCTGCTTC AGGCCGAGCGCGGCGTTCACGACCGCTCGCGCTTCGAGGCGGCCTGGTGGCAGCAGTTCGAGGACCCGACACTGGATGCCCTGGTCGGCGAAGCACTGGC TGAAAACCGCGAGCTGCGTATCGCCTATGCCCGTCTGCGTGCGGCGCGGGCTATTCGCGATGATGTCGGCAATGATCGTCTGCCCACCGTCACCGCAGGT GCGCGCGCCGATATCGGCAAGGCTCAGCAACCCGGTTTCAGCGAAGAGCGGGTGAACGCCGAGCGTTACGATCTGGGCCTGGACATGGCCTGGGAGCTGG ACCTGTTCGGCCGTATCCAGCGCAGCCTGGAGGCCAGCGAAGCGCAGGCCGAAGCTGCCGAGGCCGAGCTCTATCAGCTACAGGTCAGCCTGATCGCCGA ACTGGTGGATGCCTATGGTCAGCTGCGCGGTGCCCAGCTGCGCGAGCGGATCGCTCGCGACAACCTGGCCAACCAGCGCAATTCCCATGAACTGACCGAG CAGCTGCGCGAAGCGGGTGTCGGCAGCGAACTCGATGTGCTACGCGCCGACGCCCGTCTAGCGGCCACCGAGGCGAGCCTGCCACAGCTGCAGGCGCAGC AGACCCGCGCCCGCAACCGCATCGCCACCCTGCTCGGCCAGCGCGCCGATCAGCTCAGCGTCGACCTCTCGCCGCGCGAGCTGCCGGCGATTGCCAAGGC GCTGCCGATCGGCGACCCCGGCGAGTTGTTGCGCCGACGCCCGGACATTCGTGCGGCCGAACGCCAGCTGGCCGCCGCGACTGCAAACGTCGGCGTGGCC ACAGCCGATCTGTTTCCGAGGGTGAATCTGTCGGGCTTTCTCGGCTTCATCGCCGGACGCGGCTCGCAGATCGGCTCCAGCGCCGCACAGGCCTGGGGCG TAGCGCCCAGCATCAGCTGGGCGGCGTTCGACCTGGGCAGCGTGCGCGCCCGTCTGCGCGGTGCCGAGGCGGATGCCGACGCCGCGCTCGCCGGTTATGA GCAGCAGGTGTTGCTGGCATTGGAGGAATCGGAAAACGCCTTCAGCGACTACGCCCGCGCCCAGGACCGCCTGCTGTCGCTGCTGCGCCAGTCCACCGCC AGCCGCGCCGCGGCACAGCAGGCGGAAATTCGCTACCGCGAAGGCACGGCGGACTTTCTCGTACTGCTCGATGCCGAGCGCGAACGGTTGCTGGCCGAAG ACGCCCAGGCCCAGGCCGAAGTCGAGCTGTATCGCGGCGTAGTTGCCATCTACAAGGCGCTCGGTGGCGGCTGGAGGCCGAGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACCGGCTCTCTCGTTGGATCGCCTGCTGGTCGATCACTTCTGCCCCGGGTGCTGCAGCGCCGCGGGGCATTTTTTTGCCGCTCGGCAGCACCACTCTTT CGTCCGCCTCGCTCTTGAGCGAAGCACGCCGTGTCTGGACGCCTCAGCAGCTTAGGCTGCCGATGAATACACCGGCTGGCGCCAGCTTCGACCCGTTTGT ATTGTCGGAGGCGGACAACAATCCGGACTGACCCAGATGCCCCTAGAAGCGCTCATGAACCCATCCGTGTCCAGCCAGCTGCAGCAGGCACTGGCGCTGC TGCAGCGTCACCTGGGCGGGAACCTGCTGGCCGTGCATCTGTTCGGCTCGGCCGTTGTCGGTGGCCTGAAACCCGGCAGCGATCTCGACCTGCTCGTTAC CGTCGCCGCCCCCCTGCCGACAGCCACGCGCCACTCGCTGATGCGCGAGCTGCTGATGATTTCCGCCTGGCCGGCCAACGAGCGAATGCGCCCGCTGGAA
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| Amino Acid Sequence |
>outer membrane protein OprN
MKFFALSLLALTITGCAVGPDYRAPQPEPARLLQAERGVHDRSRFEAAWWQQFEDPTLDALVGEALAENRELRIAYARLRAARAIRDDVGNDRLPTVTAG ARADIGKAQQPGFSEERVNAERYDLGLDMAWELDLFGRIQRSLEASEAQAEAAEAELYQLQVSLIAELVDAYGQLRGAQLRERIARDNLANQRNSHELTE QLREAGVGSELDVLRADARLAATEASLPQLQAQQTRARNRIATLLGQRADQLSVDLSPRELPAIAKALPIGDPGELLRRRPDIRAAERQLAAATANVGVA TADLFPRVNLSGFLGFIAGRGSQIGSSAAQAWGVAPSISWAAFDLGSVRARLRGAEADADAALAGYEQQVLLALEESENAFSDYARAQDRLLSLLRQSTA SRAAAQQAEIRYREGTADFLVLLDAERERLLAEDAQAQAEVELYRGVVAIYKALGGGWRPSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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