Pseudomonas stutzeri A1501, PST_2024 (aroF-1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACCAGTAGCCAGTCGCAGGGAGGCATCTGGGCCGCAGCGCGGTAAATCTGCGGCTGCTCCAGCAATAGTGGCCCATGCACCGCGCTATTGACCTGCAGG CCACGGGCGAGGACGGCGTCGTATTCGCTGCGCAACAGGAAATGCACATCGAAGCCGGCGCGCGCCAGCATCAAGCCGTAGAAGCCTCCGATGGCACCCG TGCCGATGATGCCTATACGTGGATTGGCTGCAGACATAAGCACTCCAGGTCATGTGGCCGGCGGGATACCTGCGCCAACCGATTGAAAAAGCAGAACGAT AGCAGCCCGACGATGCGCATCACAGCGTCCCGCTTGGCGTTGCGAAGATCGACAGGCGGATCGACTCAATACGCCATCAATCTCGTTGTCGATTAAGCCC TTTAGCGCTAAGGTTCCGTTTCCCCGCTGCGCCCTCAAGTCCAGTTCCGCCGCACCGGGATCGCTGGCGGACGGCTCCCGTGATTCCTGACGAGTGACAA
|
|
| DNA Sequence for Gene |
>PST_2024
|aroF-1
ATGGCTGATTTACCAATCGACGACCTCAACGTTGCGTCCAACGTGACCCTGATCACGCCGGAGCAACTGAAGCGTGAAATCCCGCTGACCGCCTCGGCAT TGCAGACCGTCTCCCATGGTCGTCAGGTCGTACGCGACATTCTCGACGGCAAGGATCACCGCCTGTTCCTGGTGATCGGCCCCTGCTCCATCCATGACCT GAAAGCCGCCCACGAGTACGCCGAGCGCCTCAAGGTCCTGGCGGAAAAGGTCTCCGACAGCCTGTTCCTCGTCATGCGCGTGTATTTCGAGAAGCCCCGT ACCACTGTCGGCTGGAAAGGCCTGATCAACGATCCCTACATGGACGACTCGTTCAAGATCCAGGACGGTCTGCACATCGGCCGCAAGCTGCTGCTCGATC TGGCGGAGATGGGCCTGCCCACCGCCACCGAGGCACTCGACCCCATCTCTCCGCAGTATCTGCAGGATCTGATCAGCTGGTCGGCGATCGGCGCGCGCAC CACCGAATCGCAGACGCACCGCGAAATGGCGTCCGGGCTGTCCTCGGCTGTCGGCTTCAAGAATGGCACCGACGGCAGCCTGACCGTGGCCATCAACGCG CTGCAGTCGGTTTCCAGCCCGCACCGTTTCCTTGGCATCAACCAGTCTGGCGGCGTGTCCATCGTCACCACCAAGGGCAATAACTACGGCCACGTGGTGC TGCGCGGTGGAAACGGCAAGCCCAACTACGACTCGGTCAGCGTCGCGCTCTGCGAGCAGGAGCTGCACAAGGCGGGCATTCGCCCGAACATCATGATCGA CTGCAGCCATGCAAACTCCAACAAGGACCCTGCCCTGCAGCCGCTGGTGATGGACAACGTCGCCAACCAGATCCTCGAAGGCAACAATTCCATTGTTGGC CTCATGGTCGAAAGCCACCTTGGCTGGGGCAATCAGGCCATTCCGAAGAACCTGTGCGATCTCAAGTACGGAGTGTCCATTACCGACGCCTGTATCGACT GGGACACCACCGAGAAAGCCGTGCTGAGCATGCATGAAAAGCTCAAGGACGTGCTGCCCAAACGGCAGCGCGGCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GAAGAAAAAACGCCGGTCTCCCGGCGTTTTTTTATGGCTCTGGCGTGGCCTGGCCAGAGCCCGTTCGATTGCGTTCGATGTAGCGTTCCACATATGAGCA TGAAGGGATGACCTGATAGCCCTCCCGCTCCGCGTATTCGAGCGCATGCTGCGCCAGGGCCGCTGCGATGCCTCGCCCACGCAATGCGTCCGGAACGAAG GTGCGATACATATCCAGTGTCTGCTTGCCAAGATCCATGTAGGCAAGGTAGGCGCAGTGACCTTCGATCATCGCCTCGAAGCGATGGCCAGCCTGGTCGT GATGGACGCGCACCGTGTCGCTCATCGTGACTCCTTCAGCAGGATTGTCCTGTCTTCTTGTTTTCGGGTGGCTGCACCAGGGACGTGTCGTCGGCAGCCG CATACATTCACAGACGTCTTTTCTACCTCTTTCGAAGTCGTTCGACCAGCCTTGCGTTGATCATTATTTGCACGCCCTGCACCGGAACTTTCGATGCGTG
|
|
| Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPIDDLNVASNVTLITPEQLKREIPLTASALQTVSHGRQVVRDILDGKDHRLFLVIGPCSIHDLKAAHEYAERLKVLAEKVSDSLFLVMRVYFEKPR TTVGWKGLINDPYMDDSFKIQDGLHIGRKLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGSLTVAINA LQSVSSPHRFLGINQSGGVSIVTTKGNNYGHVVLRGGNGKPNYDSVSVALCEQELHKAGIRPNIMIDCSHANSNKDPALQPLVMDNVANQILEGNNSIVG LMVESHLGWGNQAIPKNLCDLKYGVSITDACIDWDTTEKAVLSMHEKLKDVLPKRQRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|