Pseudomonas stutzeri A1501, PST_1797
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCACATCGCGACAAGGACGGCGCAGCGAATGGCTCAAGGATTCTTCAAGCATCCTGCAGAAGTTCGACGTCTGAAGTCATATCCGGCTCCGGAGGCTTGC ACCTATTGTTATGTTATAACATCATCAGCGCATTCCTTCTCGGAGACTCTGACATGAAACCAGGCATCCACCCCGACTATCGGCCTGTGCTGTTCCATGA CACGGCAGCAGACGTTTATTTCCTGATCGGCTCGACGGCCGAGACAACGCGCACCCACCAGCACACCGACGGCAATACCTACCCGTACATCGCCCTCGAT GTCTCGAGTGCTTCGCATCCCATCTACACAGGCAAGCAGCGCAAGACCACCACCGAAGGGCGCATTGCCGGCTTCAACAAGCGCTTCGCCGGTTTCGCCA CGAAGAAATAAATCTCCCGTGTCACAGCGATCCGACCCGCTCTCTTGAGCGGACGGCACCGCTGTGCCCGTCCGCCCGATCCTTCAAGGAAGACGACCCG
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| DNA Sequence for Gene |
>PST_1797
ATGTCCCGCCGTAACCGCCTGAGCAATGCCTGCCACCGCGCTCGCCTGATCCCCGCCTTCGCCCTCTTTCCACTGTCGGCCTTCGCCGACCAGGCGCTGC ATCTGGAACCAACCGTCGTGACCGCCACGTCGACCCTCCGGCAGCTTGGCGATGCGCCTGCCAGCGTGTCGGTGATCAGTCGGGATGAGCTCGCACTGCG ACCGGTTCAGGATCTCGAGGACGCGCTGCGCGGTACTGCCGGGCTGCAGTTCACAGGCGTTGGCATGACGCGCCGGGGCGTGAGCATCCGTGGAATGGGA AGCGAGCACACCCTGGTACTGATCGATGGACAGCGCATCGGCAACGCAGGCGGCGCCGTGGCGCACGCGGATTTCGATCTGGGCTGGGTGCCGGTCGAAG CCATCGAGCGCATCGAGGTCGTGCGCGGCCCGATGTCCTCGCTGTACGGCTCCGAAGCCCTCGGCGGCGTGGTAAACGTCATCACCCGCCGCAGCACTGA TGCCTGGCAGGGAGCGGCGCAGCTCAACGGCGGAGTGAGGGAGGATGGCCGAGGAGGTCAGACCCATCAGTTAGGTGTTTATACCGGCGGTCCGCTGGTG CCTGGCGTGATTGGCCTGTCGCTGACAGGAGAGACGCGGCGCCGTCAGGAAACACCCCTGCACCGGGATACGCGGCTGTCCGAGATCGAAGGTCGAGACG CCCAAAGTGCAAGCGCAACGCTCAGCTGGACACCGGACGCGGCGCAACGCATCGACCTAGGTTTTGCAAGCGGCGAGGAAGATCGTTGGCGCAATACCCG CACTGCAGGCCGCGCACCGGTCGACTACGAATCCCGTGATCGCATCGAGCGTGAGCGGTTGTCGCTTGCGCACAGTGGAGATTGGGTCTGGGGCAAAACC TCCGTGCGCGCCTATCGCAACTCCCTGGAGCGCAACAATCGCTACACCAACGGGGTCATCCCAACTTCGCCGCGCCAGGAGCTCACCGACGACGTGATCG ATGGCAGCGCGTCCCTCCAGGCCGACACCCACCTGTTCACCCTCGGCGGCGAATGGCGCAAGGAGCAGCTTGAGGACCGAGGTTTTGCCAGCGGTGATGC GCGGATCATCCATCGCGCCCTGTTCCTGCAGGACGAAATCGAGTTCGCCCCGTCTTGGTCGCTCGTCGTTGGAAATCGCTTTGATCGGCACGAGGAATAC GGTTGGCACAACAGCCCGCGCGCCTACCTGGTGCATCACGTCAGCGATGCGCTGACGCTCAAGGGTGGCGGTGGGCGCGGCTTCAAGGCGCCGTCGCTCA AGCAGCTCTCCCCTGGCTACTCGGCCATCGGCGGCGGCGGGATGTTCACCATCTACGGCAACCCCGATCTGGAACCCGAGATCAACACCACCTACGAGCT CAGCGCGGACTACCAGGGCAGTGGCTGGACGCTCAATGGCGGCGTGTTCCAGAACAATGTTCGCGGGCTCATCCAGACCGTGTGCGTCGCCAGCTGCGGA CTCCGCGGCCGTGAGGTCCGCAACTACGACAACGTCGACAAGGCGCGAATCCGCGGCCTGGAGCTTGGTGGCGGTCTGGATCTGCCGGCCGATCTCCGCT GGGAGCTGAACTACACCTACCTCGACGCCATCGATCGCAGCGCCGATCGCCGGCTGGGCGACCGTGCCCGTCACCTGGCCAACACCCGGCTGCAATGGAC GCCCACCGCAGACTTCACCGGACAACTGCGCGGCGAGTATGTCGGCAGCCAACTGTCCTACTCCAGCAACACGACCTATGCAGTTCCCGCCTACAGCCTC TGGCACCTGGAAATCAGCCAGCGCATCAGCGACACCCTGAGCATCCGTGGTGGGATCGAGAACCTGACGGACAGAGATTTCAGCGACGCCGCGGACAACT ACGCCTTTACCGAGCCCGGGCGGACCTATCACGTCGGTGTGAGCTTGAGCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATGCGCGGATTGATCCACATCGGGCTCACCATCCTGATGGCGGGCGCGAGCCTGCCTGCCTTCGCCCAGTTGCCACGCGAGCCCCTCGCTGTACGGGTC GTCGCGACCGAGTTCGTATTGCAGGGCAAGATCGACAAGCTCAAGGAGCTGGCAGCGGACTCCCACGTCGTGCTGAGCCGTGCCGCCCTGAGCATGCCGG ACTTGGAGGCCGATCCCCCCGACCTGCTCATCCTCGACACGCCTCGGCCAGCCGACCTTTCCGCGGTGCAGCGTGCCCTAGGCGAGACACTGTCCGACAC GCGCGCACCCTGGATTCGCGTAGGTGGCGGTCCGCCCGCGTTCGGCAACCTGCCTGAGCCGGTGGCCAGGCGGCTGATCGCCTATTACGCCAATGGCGGC CAGCAGAATCTCAGGCCCCTCTTCGCTTATCTGCGCGCCTGGCATGACGGCAAGCCTACCGACTCGATCGCGCCTCCAACCGAGTTGGCCGAAACCGGCT
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| Amino Acid Sequence |
>colicin I receptor
MSRRNRLSNACHRARLIPAFALFPLSAFADQALHLEPTVVTATSTLRQLGDAPASVSVISRDELALRPVQDLEDALRGTAGLQFTGVGMTRRGVSIRGMG SEHTLVLIDGQRIGNAGGAVAHADFDLGWVPVEAIERIEVVRGPMSSLYGSEALGGVVNVITRRSTDAWQGAAQLNGGVREDGRGGQTHQLGVYTGGPLV PGVIGLSLTGETRRRQETPLHRDTRLSEIEGRDAQSASATLSWTPDAAQRIDLGFASGEEDRWRNTRTAGRAPVDYESRDRIERERLSLAHSGDWVWGKT SVRAYRNSLERNNRYTNGVIPTSPRQELTDDVIDGSASLQADTHLFTLGGEWRKEQLEDRGFASGDARIIHRALFLQDEIEFAPSWSLVVGNRFDRHEEY GWHNSPRAYLVHHVSDALTLKGGGGRGFKAPSLKQLSPGYSAIGGGGMFTIYGNPDLEPEINTTYELSADYQGSGWTLNGGVFQNNVRGLIQTVCVASCG LRGREVRNYDNVDKARIRGLELGGGLDLPADLRWELNYTYLDAIDRSADRRLGDRARHLANTRLQWTPTADFTGQLRGEYVGSQLSYSSNTTYAVPAYSL WHLEISQRISDTLSIRGGIENLTDRDFSDAADNYAFTEPGRTYHVGVSLSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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