Pseudomonas stutzeri A1501, PST_1747 (rimO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas stutzeri A1501 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GGTGCAGAGCGACCTGCTGTACAAGGCCACCCGACTGGGAGCGTTCTTCTATGCCGGAGTGGCCTTCTACCTGTATCGCCAGCGAATCCTGTGGAGCTGG AAGCTCGCCACGCTGATGGTGGTCGCCAACCTGATCTTCGCGCGCAACGACCAGTGGGAGTTCGTCCATGTGCTGACGCTCCCCTACCTCACGCTCTACC TCGCCCAGCTACGCATCCCGCGCCTGGCCGGGTTCGGCAAGGCCGGCGACTTCTCCTACGGCCTGTACATCTTCGCCTTTCCGATCCAGCAGCTGATCAT GCACTGGAGCGATGGCCGGCTACCGCTGCTGCCGTTCATGGCCTTGAGTTTCATCACCAGCCTGGCCGCCGCCGTGCTGTGCTGGCATCTGATCGAAGCG CCGGCGCTCAGGCTCAAGCGCTATCTGCCGCAGCCACCCCCACAGACTGCCGGCGTCGCTGCAACGTCCCGCTGAACGGCACGTTCGGCATGGCTAAAAA
DNA Sequence for Gene
>PST_1747 |rimO
ATGCTCAGCTCTGTATACTCGCGCGCCTTTTTCATGCGCGGTTTTCGAGGTTCTAAGTCGATGAGCAAAACGCCAACAGTCGGGTTCGTGAGCTTGGGTT GCCCCAAGGCGACCGTCGATTCCGAACGCATCCTCACTCAGCTGCGCATGGAGGGCTACCAGATCGTGCCGTCCTATGAGGATGCCGATGTGGTGGTGGT CAATACCTGCGGTTTCATCGACAGCGCCAAGGCGGAATCGCTGGATGCCATCGGCGAGGCGATCGCCGAGAACGGCAAGGTGATCGTCACCGGCTGCATG GGCGTGGACGAGAACAACATCCGCGGCGTGCATCCCAGCGTGCTCGCGGTTACCGGCCCGCAGCAGTACGAGCAGGTGGTCAACGCGGTGCACGAAGTGG TGCCGCCGAGCATCGAACACGATCCCTTCGTCGATCTGGTGCCGCCGCAGGGCATCAAGCTCACCCCGCGCCACTACGCCTATCTGAAGATTTCCGAAGG CTGCAACCACAGCTGCAGCTTCTGCATCATCCCGTCCATGCGCGGCAAGCTGGTCAGCCGCCCGGTGGGCGATGTGCTCAGCGAAGCCGAGCGCCTGGTC AAGGCCGGCGTGAAGGAAGTCCTGGTGATCAGCCAGGACACCAGCGCCTATGGCGTCGACCTCAAGTACAAGCTGGACTTCTGGAACGGCCAGCCGGTCA AGACGCGCATGCTCGAGCTGTGCGAGGAGCTGGGCAAGATGGGCGTCTGGGTGCGCCTGCACTACGTCTACCCCTACCCCAACGTCGACGACGTGATCCC GCTGATGGCCGCCGGCAAGATCCTGCCGTACCTGGACATCCCCTTCCAGCACGCCAGCCCGAAAGTGCTCAAGGCGATGAAGCGCCCGGCGTTCGAGGAC AAGACTCTGGCGCGCATCAAGAAATGGCGCGAGATCTGCCCCGAGCTGACCATTCGCTCGACCTTCATCGTCGGCTTCCCCGGCGAGACCGAAGAAGATT TCCAGTACCTGCTCGACTGGCTGACCGAAGCCCAGCTCGACCGCGTCGGCTGCTTCCAGTATTCGCCGGTTGACGGCGCGCCGGCCGAGGCCATGAACCT GGAGCCGGTACCGGACGAGATCAAGCAGGATCGCTGGGACCGCTTCATGGCGCACCAGCAGGCCATCAGCGCCGCGCGCCTGCAGCTTAAGGTCGGCAAG GAACTGGATGTGCTGATCGATGAAGTGGACGAGGACGGCGCCATCGGCCGTTCCTGGGCCGATGCCCCGGAGATCGACGGCATGGTCTACGTTGACAGCG AACAACCGCTGCAGCCGGGCGACAAGGTGCGCGTGCGCGTCACCAATGCCGACGAGTACGACCTCTGGGCCGAAGTGATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACTGCTCCGCCACAGGAAAACGCCCCGCACTAGCGGGGCGTTTCATTTCTGCGCAACCAGTCCTCGACAGCCTACGGCGAGACCTTCTCCACCGACTGAA GAACCGTCAACGCTGCGGTGGTTGCCGCACCGGTGCGCCGTTGGCGACGTAGTAGCTCGCCGTGCTGCGCGGCAACGGCTCGCGACCGCGAATCCGGTCG GCGATCTTCTCGGCCAGCATGATGGTGGTGGCGTTGAGGTTGCCGGTGATGATCTGCGGCATGATCGAGGCATCCACCACGCGCAACCCGTCCACTCCAT GCACACGGCCCTGCCCGTCGACCACGGCCATGTCGTCGGTGCCCATCCTGCAGGAGCAGGACGGGTGATAGGCCGTCTCCGCGTGCTCGCGGACGAAGGC GTCCAGCTCGGCGTCGCTCTGCGCCTCCACGCCCGGATTCAACTCGCGACCACGGTAAGGATCGAGCGCGGGCTGCGCGATGATCTCGCGGGTGATGCGG
Amino Acid Sequence
>ribosomal protein S12 methylthiotransferase
MLSSVYSRAFFMRGFRGSKSMSKTPTVGFVSLGCPKATVDSERILTQLRMEGYQIVPSYEDADVVVVNTCGFIDSAKAESLDAIGEAIAENGKVIVTGCM GVDENNIRGVHPSVLAVTGPQQYEQVVNAVHEVVPPSIEHDPFVDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAERLV KAGVKEVLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEELGKMGVWVRLHYVYPYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFED KTLARIKKWREICPELTIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVDGAPAEAMNLEPVPDEIKQDRWDRFMAHQQAISAARLQLKVGK ELDVLIDEVDEDGAIGRSWADAPEIDGMVYVDSEQPLQPGDKVRVRVTNADEYDLWAEVI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site