Pseudomonas stutzeri A1501, PST_1746 (betA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTCGCGCACATGGACAAGGTGCTCGACTACATCGCCCAGGGCAAGGCCGCCGGCGCGCGCATTCTGTGTGGCGGAGAGCGGGTGACCGAGGGCGAGTA TGCCAGGGGCGCCTTCGTCGCGCCGACCATCTTCAGCGACTGCAGCGACGACATGAGCATCGTGCGCGAAGAGATCTTCGGCCCGGTGCTGAGCCTGCTC GAATACCAGGGCGAGGACGAAGCCATCCGCCGCGCCAACGACACCGAGTACGGCCTCGCCGCGGGCGTAGTCACCCCTGACCTGGCGCGGGCGCACCGCA TCATCCATCGCCTCGAGGCCGGCATCTGCTGGATCAATACCTGGGGCGAATCGCCGGCGCAGATGCCGGTCGGTGGCTACAAGCAGTCAGGCATCGGCCG CGAGAACGGCATCGCCTCGCTGGCGCACTACACGCGGGTCAAATCGGTACAGGTGGAGCTGGGCGAGTTCGCCTCGGTGTTCTGAGGGAAAGGAGGACGC
|
|
| DNA Sequence for Gene |
>PST_1746
|betA
ATGGAATACGACTACATCGTCATCGGCGCGGGTTCGGCCGGTAATGTGCTGGCCGCGCGCCTGACCGAGGACGCCGAGGTCAGCGTGCTGCTGCTGGAAG CCGGCGGCCCGGACTACCGGCTGGATTTCCGCACCCAGATGCCTGCCGCGCTGGCGTATCCGCTGCAAGGCACGCGCTACAACTGGGCCTACAAGACCGA TCCCGAACCGCACATGAACAACCGCCGCATGGACTGCGGCCGCGGCAAGGGCCTGGGTGGTTCCTCGCTGATCAACGGCATGTGCTACATCCGCGGCAAC GCCCTGGACTACGACAACTGGGCCAAGGCACCGGGGCTGGAGGACTGGACCTACCTCGACTGCCTGCCGTACTTCCGCAAGGCCGAGTCGCGCGACATCG GCCCCAACGACTACCACGGCGGCGACGGCCCGGTCAGCGTGACCACGCCCAAGGCCGACAACAACGAGCTGTTCCATGCCATGGTGGAAGCGGGCGTGCA GGCTGGCTATCCGCGTACCGATGACCTCAATGGCTACCAGCAGGAAGGCTTCGGCCCGATGGATCGCACCGTCACGCCCCAGGGCCGGCGCGCGAGCACG GCGCGCGGTTATCTGGACCAGGCCAAGGAGCGGCCGAACCTGACCATCCATACCCATGCCGTCACCGACCGCGTGCTGTTCGAGGGCAAGCGTGCCGTCG GCGTTCGTTATCTGCGCGGCCGCGAGCAGCCCCACGTTGCGCGCGCGCGCCGCGAAGTGCTGCTGTGCGGCGGCGCCATCGCCTCGCCGCAGATCCTGCA GCGTTCGGGGGTCGGCCCTGGCGCGTTGCTGAAGAAGCTCGGCGTCACGCTGGTGCAGGAGTTGCCCGGCGTAGGCCAGAACCTGCAGGACCACCTGGAG ATGTACCTGCAGTTCGAGTGCCTGAAGCCGGTGTCGCTGTACCCGGCGCTCAAGTGGTGGAACCAGCCGGCGATCGGCGCCGAGTGGCTGTTCCTCGGCA GCGGCATCGGTGCCAGCAACCAGTTCGAGGCCGGCGGCTTCATCCGCAGCAGCGACGAGTTCGAATGGCCGAACATCCAGTTCCACTTCCTGCCGGTGGC GGTCAGCTACAACGGCAGCAACGCCCATGACGGCCACAGCTTCCAGGCCCACGTCGGCTCGATGCGTTCACCCAGTCGCGGGCGCATCGAGATTCGCTCC ACCGATCCGCGGGTCGACCCCAGCATCCTGTTCAACTACATGGCCCACGAGCAGGACTGGCGCGAGTTTCGCGATGCCATCCGCATCACCCGCGAGATCA TCGCGCAGCCCGCGCTCGATCCTTACCGTGGTCGCGAGTTGAATCCGGGCGTGGAGGCGCAGAGCGACGCCGAGCTGGACGCCTTCGTCCGCGAGCACGC GGAGACGGCCTATCACCCGTCCTGCTCCTGCAGGATGGGCACCGACGACATGGCCGTGGTCGACGGGCAGGGCCGTGTGCATGGAGTGGACGGGTTGCGC GTGGTGGATGCCTCGATCATGCCGCAGATCATCACCGGCAACCTCAACGCCACCACCATCATGCTGGCCGAGAAGATCGCCGACCGGATTCGCGGTCGCG AGCCGTTGCCGCGCAGCACGGCGAGCTACTACGTCGCCAACGGCGCACCGGTGCGGCAACCACCGCAGCGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGGTTCTTCAGTCGGTGGAGAAGGTCTCGCCGTAGGCTGTCGAGGACTGGTTGCGCAGAAATGAAACGCCCCGCTAGTGCGGGGCGTTTTCCTGTGGCGG AGCAGTTCAGATCACTTCGGCCCAGAGGTCGTACTCGTCGGCATTGGTGACGCGCACGCGCACCTTGTCGCCCGGCTGCAGCGGTTGTTCGCTGTCAACG TAGACCATGCCGTCGATCTCCGGGGCATCGGCCCAGGAACGGCCGATGGCGCCGTCCTCGTCCACTTCATCGATCAGCACATCCAGTTCCTTGCCGACCT TAAGCTGCAGGCGCGCGGCGCTGATGGCCTGCTGGTGCGCCATGAAGCGGTCCCAGCGATCCTGCTTGATCTCGTCCGGTACCGGCTCCAGGTTCATGGC CTCGGCCGGCGCGCCGTCAACCGGCGAATACTGGAAGCAGCCGACGCGGTCGAGCTGGGCTTCGGTCAGCCAGTCGAGCAGGTACTGGAAATCTTCTTCG
|
|
| Amino Acid Sequence |
>choline dehydrogenase
MEYDYIVIGAGSAGNVLAARLTEDAEVSVLLLEAGGPDYRLDFRTQMPAALAYPLQGTRYNWAYKTDPEPHMNNRRMDCGRGKGLGGSSLINGMCYIRGN ALDYDNWAKAPGLEDWTYLDCLPYFRKAESRDIGPNDYHGGDGPVSVTTPKADNNELFHAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRAST ARGYLDQAKERPNLTIHTHAVTDRVLFEGKRAVGVRYLRGREQPHVARARREVLLCGGAIASPQILQRSGVGPGALLKKLGVTLVQELPGVGQNLQDHLE MYLQFECLKPVSLYPALKWWNQPAIGAEWLFLGSGIGASNQFEAGGFIRSSDEFEWPNIQFHFLPVAVSYNGSNAHDGHSFQAHVGSMRSPSRGRIEIRS TDPRVDPSILFNYMAHEQDWREFRDAIRITREIIAQPALDPYRGRELNPGVEAQSDAELDAFVREHAETAYHPSCSCRMGTDDMAVVDGQGRVHGVDGLR VVDASIMPQIITGNLNATTIMLAEKIADRIRGREPLPRSTASYYVANGAPVRQPPQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|