Pseudomonas stutzeri A1501, PST_1295 (cobD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCGCATGATCGAGACGCTCGGCGCACTGGTGCACGCCAGCGAGCGCGCGCGGGCGCTGACCACCGAGCTCCAGGCCGGGCTGGACGTCATCCGCGCCA GCGCGGCCAGCTTGCCTCGCCGGCCGCGGGTGTATTTCGAGGAGTGGAACGAGCCGCTGATTTCCGGCATCGGCTGGGTCAGCGAACTGATCGAACTGGC CGGCGGCGAGGACTGCTTCGCCGAGCTGGCGCCGTTCAAGCGCGCCAAGCAACGCATCATCGAGGATCCGCAGGATGTGGTGCGGCGCGCGCCGGAGCTG ATCGTCGGCTCCTGGTGCGGCCGCCGTTTCCGCCCGGAGCAGGTGGCGGCCCGACCGGGCTGGCAGGCGATCCCGGCGGTACGCAATGGCCAGCTGCACG AGATCAAGTCGCCGGACATCCTCAACCCCGGCCCGGCGGTGCTGACCGATGGCGTGCGGCAGCTGCATGCCCTGATTCGCGCGTGTGCGGAGCGCCCGGA
|
|
| DNA Sequence for Gene |
>PST_1295
|cobD
GTGAGCGTGTTCCTCAGCGTCATCGGGGCGCTGCTGCTGGATGCGCTGCTGGGTGAGCCGAAGCGTGCCCATCCGCTAGTGGCCTTCGGACGCCTGGCCG ACCGCCTGGAGCAGCATTTCAACGGTGCTGCGGGCCGTGGCTGGCGCAGCCATGGGGTGACAGCCTGGTGCCTGGCCGTGCTGCCGCTGACGCTGCTGGC CTGGCTGCTCAGCCTGTTGCCGGGCATCGGCTGGCTGGCGGAGATCGTGCTGCTCTATCTGGCCCTCGGCCTGCGCAGCCTGGGCGAGCATGCGCTGCCG GTGGCCCAGGCGTTGTGGCGCCACGACCTGCCCGAGGCGCGTCGGCGGGTGGCCTGCATCGTCAGCCGAGACACCAGCCAGCTGGATGAAGAGGGCGTGG CCCGTGCTGCCACCGAGTCGGTGCTGGAGAACGGCAGCGATGCGGTGTTCGCTGCGCTGTTCTGGTTCATCGTCGCGGGTGCGCCGGGTGTGGTGCTGTA CCGTCTGAGCAACACGCTGGACGCCATGTGGGGCTATCGCAACGCGCGCTTCGAGCGCTTTGGCTGGGCCGCGGCGCGCATCGACGATCTGCTCAATTAC GTGCCGGCACGGCTGGTCGCCGTGACCTATGCCTTGCTCGGCCGGACCCGTCGCGCGCTGCGTTGCTGGCGTACCCAGGCGCCCTTGTGGGACAGCCCCA ACGCCGGCCCGGTGATGGCCGCGGGGGCCGGTGCGCTGGGCGTGGTGCTGGGCGGCGCGGCGATCTATCACGGGGAACTGCATGCCCGACCGGAGCTGGG CCGGGGCAGTGCCCCGCAGGCGCGGCATATCGAACATGCGCTGGATCTGGTCTGGGCCGGTGTCGGCGTCTGGCTGCTGGTGCTGCTGTTCGGAGGCTGG CTCTATGCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCACGGCGGTCGGCTGCGGCTGGCCGCGCAGCGCCACGGAATCCCGTTGTCGGACTGGCTGGACCTGTCCACCGGCGTGGCGCCCTATCACCCGGACCTG CCGACCATCACCAGCGATGCCTGGGCACGCCTGCCGGAGCCCGATGATGGGTTGGACGCGGCGGCGCAGCAGTACTACGGGGCACGCGCGGTGCTGCCGG TGGCCGGCTCGCAAAGCGCCATCCAGGCCTTGCCGCGCCTGCGCGGGCCGGCGAGGGTCGGCATCGTCTCGCCCTGTTACGCCGAACACGCCAAGGCCTG GCGGCGTGCCGGTCACCGAGTCGTCGAGCTGTGCGAAGCCAGCGTGCCGCGGGCGCTGGATCAGTTGGACGTGCTGCTGGTGGTCAATCCGAACAACCCA ACCGGGCAGCTGATCGCAGCGCAGCGCCTGCTGCAATGGCGCAGCGCACTGGCGACCTACGGGGGCTGGCTGGTGGTGGACGAAGCGTTCATGGACTGCA
|
|
| Amino Acid Sequence |
>cobalamin biosynthesis protein
MSVFLSVIGALLLDALLGEPKRAHPLVAFGRLADRLEQHFNGAAGRGWRSHGVTAWCLAVLPLTLLAWLLSLLPGIGWLAEIVLLYLALGLRSLGEHALP VAQALWRHDLPEARRRVACIVSRDTSQLDEEGVARAATESVLENGSDAVFAALFWFIVAGAPGVVLYRLSNTLDAMWGYRNARFERFGWAAARIDDLLNY VPARLVAVTYALLGRTRRALRCWRTQAPLWDSPNAGPVMAAGAGALGVVLGGAAIYHGELHARPELGRGSAPQARHIEHALDLVWAGVGVWLLVLLFGGW LYA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|