Pseudomonas stutzeri A1501, PST_1222 (nadB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009435 NAD biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46977
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008734 L-aspartate oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psa00760 Nicotinate and nicotinamide metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psa00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 46 442 0.0
Pfam PF02910 Fumarate reductase flavoprotein C-term IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal 479 559 6.1E-12
NCBIfam TIGR00551 JCVI: L-aspartate oxidase IPR005288 L-aspartate oxidase 45 558 0.0
FunFam G3DSA:1.20.58.100:FF:000002 L-aspartate oxidase - - 464 573 8.2E-47
SUPERFAMILY SSF56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily 276 391 4.93E-43
PIRSF PIRSF000171 SDHA_APRA_LASPO - - 35 570 7.7E-34
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 36 486 6.22E-73
Gene3D G3DSA:3.90.700.10 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily 286 399 0.0
SUPERFAMILY SSF46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily 463 565 2.88E-30
FunFam G3DSA:3.90.700.10:FF:000002 L-aspartate oxidase - - 286 399 8.0E-53
Pfam PF00890 FAD binding domain IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain 46 430 3.7E-102
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 47 66 8.0E-9
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 393 415 8.0E-9
FunFam G3DSA:3.50.50.60:FF:000060 L-aspartate oxidase - - 46 299 3.0E-112
PANTHER PTHR42716 L-ASPARTATE OXIDASE IPR005288 L-aspartate oxidase 35 564 0.0
Gene3D G3DSA:1.20.58.100 - - - 463 575 3.8E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.