Pseudomonas stutzeri A1501, PST_1088 (lpxC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGGTCTGGACCTGTCGCTCGGCGAGTACGCCGCAGTGGGCGAGATCATCGAGGCCTTCGCTTCCGATGAAGCCACTGTCAAGGTTGGTGCCGTGATC GATCCGGACATGGCTGACGAGCTGCATGTCACCGTGGTCGCCACCGGCCTGGGTCCGCGCAACGAAAAGCCGGTCAAGGTCATCGACAATACCGTGCAGA CCGTCGCCGCTGCTGCTCCGGCCCCGCGCCAGCAGGAGCAGGCTGCCGTGAACTACCGCGATCTGGAGCGCCCTACCGTCATGCGCAACCAGGCCCATGC AGCGGCCACCGCTGCCAAGCTGAATCCGCAGGAGGATCTGGATTATCTGGATATTCCGGCGTTCCTGCGTCGTCAGGCCGATTGATTGAAGTTATCAGGA GTATTGGTGTGATTGGTGTTCAGCAAAGTTGGCATCTGCTATTATCGCCGCCAATTGTTGAAAACTATTCGCAACTAGTGCTGCAGCGAAGCAAAAGGCC
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| DNA Sequence for Gene |
>PST_1088
|lpxC
ATGATCAGACAACGCACCCTGAAGAACATCATTCGCGCCACCGGCGTCGGCTTGCATTCGGGAGAGAAGGTTTATCTCACCCTGAAACCGGCACCGGTGG ACACCGGGATCGTGTTCTGTCGCACCGACCTCAACCCGCCTGTGGAGATTCCCGCGCGGGCCGAGAATGTTGGCGAAACCACCATGTCCACGACGCTGGT CAACGGTGACGTCAAGGTCGACACTGTGGAGCATCTGCTTTCGGCAATGGCCGGCCTGGGGATCGACAACGCCTACGTCGAACTCTCCGCGTCGGAAGTG CCGATCATGGACGGCAGCGCTGGGCCTTTCGTATTCCTGATTCAATCCGCCGGCCTGCAGGAGCAGGACGCCCACAAGAAGTTCATCCGCATCAAGCGTG AAGTGACGGTCGAGGAGGGCGACAAGCGCGCGACCTTCCTGCCTTTCGACGGCTTCAAGGTGAGCTTCGAGATCGATTTCGATCACCCGGTTTTCAAGGG TCGCACCCAGACTGCCAGTGTGGACTTCTCGAGCACTTCCTTCGTCAAGGAAGTCAGCCGTGCACGTACCTTCGGGTTCATGCGTGACATCGAGTTCCTC CGCTCGCACAACCTGGCTCTGGGCGGCAGCGTCGAGAACGCCATCGTGGTGGACGAAACCAGTGTGCTCAACGAAGACGGCCTGCGCTACGAGGACGAGT TCGTGAAGCACAAGATTCTCGATGCCATCGGTGATCTGTACTTGCTGGGCACCAGTCTGATCGGCGAATTCCGCGGCTACAAATCCGGCCACGCGTTGAA TAACCGCTTGCTGCGCACCCTGATGGAACAAAAGGATGCGTGGGAACTGGTGACCTTCGATGACCCGCAGACCGCACCGATCTCCTACATGCGTCCGGTG GCAGCCGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGTACCTCTCTTCCTAGATTTAAGGCCACCCTCGGGTGGCCTTTTTTATGGTTCTTCGCGGACTCTGGGGGAAGAGCGAGTTGACAGTCAGGGAAGCA GGTAAATTGGCAGTCGCCAAACACACCCTTCACCTGTCCCTGCTGTCGCCGTGCATCCTATTGATCTTGCCTCGTTCTGGCCAGGCTATGACGCCGTTGC CTGCCGTTCATCCGCCAACAACTCCCTTCTGATTGAGCTCGAGCCTCAAGCCGGTTCAGTGCCCAAGTGCGGGCGTTGTGGTCAGCTCAGTCCGTTGATT CACGAGCGCCGAATTCGTCTGGTGCGCGATCGTGATCTGTTCGATCAGCGCGTCTTGCTTCAACTACCCGTGCGCCGAGTCGATTGCCTGAACTGTGGTC GGGTGACCGAGCGGATCGACTGGCTGGAGCCTGCATCTCGCCTGACCCGGCGGTTACAGGTCTGGCTCGAAAGCTTGCTGCGGCTGCTGCCGATCAGCCA
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| Amino Acid Sequence |
>UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
MIRQRTLKNIIRATGVGLHSGEKVYLTLKPAPVDTGIVFCRTDLNPPVEIPARAENVGETTMSTTLVNGDVKVDTVEHLLSAMAGLGIDNAYVELSASEV PIMDGSAGPFVFLIQSAGLQEQDAHKKFIRIKREVTVEEGDKRATFLPFDGFKVSFEIDFDHPVFKGRTQTASVDFSSTSFVKEVSRARTFGFMRDIEFL RSHNLALGGSVENAIVVDETSVLNEDGLRYEDEFVKHKILDAIGDLYLLGTSLIGEFRGYKSGHALNNRLLRTLMEQKDAWELVTFDDPQTAPISYMRPV AAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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