Pseudomonas aeruginosa AZPAE14352, NQ48_RS13630 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14352 AZPAE14352_contig_9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGGCAGGCGGTGCTGGAGATGAACTTCGAGTACGTCAACTCGGAGGTCAACCCGGCCATGGCCAACATCGTCAGTCCCAGCGAGGTGGTGGTGGTCTC CACCTTCCACATCGAACTGGACGGCGGTGGCGGCGACCTGCACATCACCATGCCCTATTCGATGATCGAGCCGATCCGCGAGATGCTCGACGCCGGTTTC CAGTCCGACCACGACGACCAGGACGAGCGCTGGATCAAGGCCCTGCGCGAGGACGTGCTGGACGTCCAGGTACCGCTCGGCGCCACCGTGGTCCGCCGCC AGCTCAAGCTGCGCGACATCCTGCACATGCAGCCGGGCGACGTGATCCCGGTGGAGATGCCGGAACACATGGTGATGCGCGCCAACGGCGTGCCCGCCTT CAAGGTCAAGCTGGGCGCCCACAAGGGCAACCTGGCGCTACAGATTCTCGAAGCGGTCGAGCGCTCGCGCTGACCGCTTCCCCCGGAGGAAAGACGAACC
DNA Sequence for Gene
>NQ48_RS13630 |fliN
ATGGCAGACGAAGAAAAAGTGACCACCGAGGAACAGGCACTGGCCGACGAATGGGCGGCGGCGCTGGCCGAGGCGGGCGACGCCAGCCAGGACGACATCG ATGCGCTGATGGCCCAGGGCGGCGCGACTCCCGTGGCGGAGCCGAGTACCCCGCGGGCGCCGATGGAAGAGTTCGGCGCTTCGCCGAAGGCACCGACCAT TTCCGGCCTGGAGGGGCCCAACCTGGATGTGATTCTGGACATCCCGGTGACCATTTCCATGGAGGTCGGGCATACCGACATCAGCATCCGCAACCTGCTG CAGCTCAACCAGGGGTCGGTGATCGAACTCGATCGCCTGGCCGGCGAGCCGCTGGACGTACTGGTCAACGGCACCCTGATCGCCCACGGCGAGGTGGTGG TGGTGAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGTCCCAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CATGCGTCGCTACCTGTTCGCCGGCTTCCTGCCGGCACTCGCCTCGCTGAGCGCGCCGCTGTGCGCCGCGGAGGGGACGACGGGTGCCGCCGCGCCGACG GTGGGCGCCGCTTCCGGCGCCGCCGCGCAACTGGCCCAACTGGTGCTCGGCCTGGGCCTGGTGATCGGCCTGATCTTCCTGCTCGCCTGGCTGGTGCGCC GGGTGCAACAGGCCGGTCCGCGCGGCAACCGCTTGATCCGCACCCTTGCCAGTCAGCCGCTGGGTCCGCGCGACCGGCTGGTGCTGGTGCAGGTCGGCGA GGAGCAGATCCTGCTCGGCCTGACGCCCGGCCGGATCACGCCGCTGCACGTGCTCAAGGAGCCGGTACACCTGCCGGACGGCGAGCCGGCCACGCCGGAA TTCGCCCAGCGCCTGCTGGAGCTGCTGAACAAGGACCCCAAGGGTAAGCCATGACTCCGCGCATCTCCCTGGCCGGCGCGCTCGCCGCGCTCTGCCTCCT
Amino Acid Sequence
>flagellar motor switch protein FliN
MADEEKVTTEEQALADEWAAALAEAGDASQDDIDALMAQGGATPVAEPSTPRAPMEEFGASPKAPTISGLEGPNLDVILDIPVTISMEVGHTDISIRNLL QLNQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site