Pseudomonas aeruginosa AZPAE14352, NQ48_RS13345
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14352 AZPAE14352_contig_9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGTCCGCTCGCGCGTTTTCTGGTCTTGGGAGGCGTCGACAGTAATCCAGGAAGGGTGTCACGGGAGGAAATGAACCAGTGGGTAGTCGAAGGCTTGTTG GAGTGGCCTGGCCATGTGCATGACATCAAGGCATGGGTGGCCAATACGAGTGTATTCGTGCTGCCATCCTATTATAGAGAAGGTGTGCCGAGAAGTAGTC AGGAGGCCATGTCCCTGGGGAAGCCTGTGATAACGACTGACTGGACGGGATGTCGTGAAACGGTACTGGATGGTGTCAATGGGTTTCTGGTACCGATCAA GAGTCCGCAGAGTTTAGCCGCGGCAATGTTGAAGTTCATCGAGTCGCCTTCGCTCATCGCACGTATGGGAGAAGCCAGTAGATCGTTGGCGGAACAGCGC TATGACGTTTTCAGGATAAACAATACGATGCTTTCTGCGTTGTAGGGATCTGGCTGTGAGTTGTATGAATGGTAATGCGCCGGTACTTGCGGCCGTAGAT
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| DNA Sequence for Gene |
>NQ48_RS13345
ATAAGCAAGGGTTTTAGAGTCTACAGGGCTCCTCATCAAAGGATGTTGCAGGCCATCTGGGGTGAGAGAAAGAAGTTTTATTCGGAATTCTGGGCTCTGC GGAATGTGAGTTTCCAGGTTTTTCCTGGGGAGGTGGTTGGAGTAATCGGCTGCAACGGCTCCGGGAAGTCCACCTTGCTGCAGATACTTGCGGGTACCTT GCGACCTACGAGTGGGCAGGTGGTTCGCCCAGAAAGGGTAGCGGCACTGTTGGAGCTGGGGGCCGGTTTCAACATGGAGTACACCGGCAGGGAAAACATA ATCTTCAATGCCATGCTTCTTGGACTGGGCGAGCAGGAAATTTCTGAACGCCTCGACGAGATAATCCAGTTTGCCGATATCGGTGAGTTCATCGATCGTC CAGTTAGAACATATTCGAGCGGTATGTTCGTGCGTTTGGCTTTCTCCATTGCGGCATATGTCGATGCCGATGTGCTGATCGTGGACGAGGCCCTGGCGGT AGGTGACGCCGCGTTTCAGTTCAAATGCCTGAACCGGCTTGAAGAACTGCTGCTGAAAGGCATCACCATCCTGCTGGTCTCCCACGATATACAGTTGATC AAGAGTTACTGTAGTCGAGCGATCTATCTATCCAAAGGTAGAGTGATATTCGATGGCGACTGTGAAACAGCCACGGAACTCTATCTGCGGGACAGTATAG AGACACAGCGGGCGGAAGTCCGCTCAGGAAGCCTGATCGCTTCTGGCGAACACGGGAACTCGGTAATTGCATATGGAAATGGGCAGGGCAGGTTTCTATC CATCCGCATGGGCGTACTTGACGAAGCCCGGGATTACTTCGATTCGGGCGAACGTGTCTGGGTCGAGGTACTTGTGCAATTTGACCTACCCGTCCCGGAG CACCCAAAGATCACCCTGACTATCCGTGACCAGCGCGGTTACAACCTCTATGGCATAAACAATTTATTGCTGGGCAAGGCTTTGAATGTCGAGCCTGACG GGCGCTTGAGAATACGCATCAGCTTCGACTGCGACTTGCAGGCCGGCGAATACGCCTTGACGTTTCGTCTGGAGAACTCTTTGTCGGAGTCCGTTTGCGA ACTCATGGATAAACAGGTCAATGCGGCGATATTCAGGGTCTTCAATTCGCCCAAGTGCTTCGATGCAGTGGTGAATCTGCATGGGGCATTCGAGCCGGTT TCGTTCTGCTGCGAGACCCGGGCTACCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTCATCGTCTTTGACCATGGTATTCGTCGTCCACGCCGGCGAGTTGGAAATCAAGTCTGCCGTGTTGGCGGCTTCTCTACGCAAACGCTTTGGCTTTTC CATGGATATCATTGCCGCATGTCCATCGGGAAAGGCTGACTGGGGTGTGCCAAGCGATGCATCCCGACGCTTATATGAACGTTTGGGCATTCCTCTTTTG CCTATGGATAGTCCTTTCGGGCCAGAGTATCCAATAGGCAACAAGTTCGCGGCGTTGGCGCTGGGGCCGGCTGTTGGGCATACGTTGTTTCTCGACAGTG ACATGATCTGTGTCGATGCATGCGAAGCTGACATGCTTTGTCGTTTCGACGCGGCACTCAAACCTGCCGATATGGCATTGGTGGCAAAACAGAACGATTA CTGGCAACGCATATACGCCCATGCGGGATCGGCATTGCCTGGAGATCGGGTAGTGACCACTTGTTCCGGGGAAGCGATGCCTGCGTACTATAACGCTGGC
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| Amino Acid Sequence |
>ABC transporter ATP-binding protein
MSKGFRVYRAPHQRMLQAIWGERKKFYSEFWALRNVSFQVFPGEVVGVIGCNGSGKSTLLQILAGTLRPTSGQVVRPERVAALLELGAGFNMEYTGRENI IFNAMLLGLGEQEISERLDEIIQFADIGEFIDRPVRTYSSGMFVRLAFSIAAYVDADVLIVDEALAVGDAAFQFKCLNRLEELLLKGITILLVSHDIQLI KSYCSRAIYLSKGRVIFDGDCETATELYLRDSIETQRAEVRSGSLIASGEHGNSVIAYGNGQGRFLSIRMGVLDEARDYFDSGERVWVEVLVQFDLPVPE HPKITLTIRDQRGYNLYGINNLLLGKALNVEPDGRLRIRISFDCDLQAGEYALTFRLENSLSESVCELMDKQVNAAIFRVFNSPKCFDAVVNLHGAFEPV SFCCETRATQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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