Pseudomonas aeruginosa AZPAE14352, NQ48_RS11165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14352 AZPAE14352_contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAACGCATTCGCCACAGACAACTCGATGGCAACCAACCCTTGAAGCAGACGGATTACAATCAGGTTTCAAAGCATAATTCGTTTGCTTTCAAACAGAAT AGCCTCGCTCTCGAAGAGACCAACTGGAATACATAGGCGAAGCCATTTTCCAATTTGTGCACGGAGTTTGCTTATACCTCTTTCATCACAGTAAGAGGGG CCGTACGGAACATGACATTTTTATTACAAGGCCCCGCCAATCGGAAAAAGCGACTTGAGAAGCGACCTCAACAAGAGTGACCAACCCCGCGACATACGTC ATTTTTTCAACTGCGCACCTACGCAGATGCGACATGCGTCATGCAATTTTGCGACAGCACGGTAAAGAATCCGTCGCTTCGGAACCTCAACTATCGCCAA GAAACACTGCGTGCTATAAGTTAGCGCCGACAAGAAGAACTAGCCGTCACTGCGGCACTGTGATGGCAGAGATAATTTCAAAACCAAAGGAGCAATCACA
DNA Sequence for Gene
>NQ48_RS11165
ATGAAAGTGATGAAGTGGAGCGCCATTGCACTGGCGGTTTCCGCAGGTAGCACTCAGTTCGCCGTGGCCGACGCATTCGTCAGCGATCAGGCCGAAGCGA AGGGGTTCATCGAAGACAGCAGCCTGAACCTGCTGCTCCGCAACTACTATTTCAACCGTGACGGCAAGGAAGGTCGGGGTGATCGCGTCGATTGGACCCA GGGCTTCCTCACCACCTACGAATCCGGCTTCACTCAAGGCACCGTGGGCTTCGGCGTCGATGCCTTCGGCTACCTGGGCCTGAAGCTCGACGGCACCTCC GACAAGACCGGCACCGGCAACCTGCCGGTGATGAACGACGGCAAGCCGCGCGATGACTACAGCCGCGCCGGCGGCGCCGTGAAGGTGCGCATCTCCAAGA CCATGCTGAAGTGGGGCGAGATGCAACCGACCGCCCCGGTCTTCGCCGCTGGCGGCAGCCGCCTGTTCCCGCAGACCGCGACCGGCTTCCAGCTGCAGAG CAGCGAATTCGAAGGGCTCGACCTCGAGGCAGGCCACTTCACCGAGGGCAAGGAGCCGACCACCGTCAAATCGCGCGGTGAGCTCTACGCCACCTACGCC GGCCAGACAGCCAAGAGCGCCGACTTCGCTGGCGGCCGCTACGCGATCACCGACAACCTCAGCGCCTCCCTCTATGGCGCAGAGCTGAAAGACATCTATC GCCAGTACTACCTGAACACCAACTACACCATCCCGCTGGCCTCCGATCAATCGCTGGGCTTCGACTTCAACATCTACCGCACCACCGACGAAGGCAAGTC CAAGGCTGGCGACATCAGCAACACCACCTGGTCCCTGGCGGGCGCGTATACCCTGGACGCCCACACCTTCACCCTGGCCTACCAGCAGGTGCATGGCGAC GAGCCGTTCGACTACATCGGCTTCGGCGGCAACGGTTCCGGCGCCGGCGGCGACTCGATCTTCCTCGCCAACTCCGTCCAGTACTCCGACTTCAACGGTC CTGGCGAGAAATCCTGGCAGGCCCGCTACGACCTGAACCTGGCCTCCTACGGCGTTCCTGGCCTCACCTTCATGCTGCGTTACATCAATGGTAAGGACAT CGACGGTACCAAGGTCGATTCCAGCTCCTCCTATGCAGGCCTGTACGGCGAGGATGGCAAGCACCACGAAACCAACCTCGAAGCCAAGTACGTGGTCCAG TCCGGTCCGGCCAAGGACCTGTCGTTCCGCATCCGCCAGGCCTGGCACCGTGCCAACGCCGACCAGGGCGAAGGCGACCAGAACGAGTTCCGCCTGATCG TCGACTATCCGCTGTCGATCCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGACCGACAGGCAACGAAAAAACCCGGCATCGCCGGGTTTTTTCTTCTTGGCGGCAACGCGCCTATAAAGGAAGGGCGTAGGTACCGGTGACATGGGCC ACCAGGTCTTCCTCATTACTCTGCGAAAACACCCCGACCTCGCAGACGACCTGGCGCCGCCCCAGCTTGAGGATGCTCGCCTCGGCCAACAGGTCCTCGG GCCTGGGCTTGCTGAGGAAGTTGATGTTCAGGTTCGAGGTCACGGCCATCTCGACCGCCCCGAGACGCCCGAGAATGACCGCGTACATCGCCGCGTCGGC CAGCGCCATGATGGTCGGGCCGGACAGCGTTCCACCGGGACGCACCAGCTTGCCGTGAAAAGGTATGCGCGCCAGCGCATGTCGTTCGTCGAGACGCTCG ACACGAAAATCGATGTCCTCGGCCATGGGCAGCCCCATGCGGATCAACGCCTGTACCTGCGCCGCGTTCATTGCCTGCTGACTCCTCATCATCGATGGCC
Amino Acid Sequence
>porin
MKVMKWSAIALAVSAGSTQFAVADAFVSDQAEAKGFIEDSSLNLLLRNYYFNRDGKEGRGDRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGTS DKTGTGNLPVMNDGKPRDDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGFQLQSSEFEGLDLEAGHFTEGKEPTTVKSRGELYATYA GQTAKSADFAGGRYAITDNLSASLYGAELKDIYRQYYLNTNYTIPLASDQSLGFDFNIYRTTDEGKSKAGDISNTTWSLAGAYTLDAHTFTLAYQQVHGD EPFDYIGFGGNGSGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMLRYINGKDIDGTKVDSSSSYAGLYGEDGKHHETNLEAKYVVQ SGPAKDLSFRIRQAWHRANADQGEGDQNEFRLIVDYPLSIL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site