Strain | Pseudomonas aeruginosa strain AZPAE14352 AZPAE14352_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGGTGCGCCTGGCGCGCGATGGCGAGCCGCCGATACCGGGGCAGATCCTGCTGGCGGGGACCAACAATCACATCCGCCTGCTGCGCAACGGTTCGCTGG TGTACACCGCCGAACCGCGTTCTTTCGTCTACCGGCCGTCCATCGACGTGTTTTTCGAGAGCGTGGCGAATTATTGGCGTGGCGATGCCGTGGGCGTGCT GCTGACCGGCATGGGCCGCGACGGCGCCCAGGGCCTCAAGCAGATGCGCGAGCGCGGTTTCCTCACCATCGCCCAGGACCAGGCCAGTTGCGCGGTCTAC GGGATGCCGAAGGCCGCGGCGGCGATCGATGCAGCGGTGCAGATCCTTTCCCTGGAAAAGATCGCCCCGCGCCTGGCGGAGGTATTCGATTAGCCGGGTT CGACTCCGGCCAGGCGCCAGGGTAGGCGCCGGCGCCCGCCGCGGCGGTGCGTGGAACAGCATTCAATTTGATACGAGGGGCCCCGGTCCCGGAGAGAAAC
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DNA Sequence for Gene |
>NQ48_RS06370
ATGCACAACCCTCATGAGAGCAAGACCGACCTGGGCGCCCCTCTGGACGGCGCGGTCATGGTACTGCTTGTCGATGATCAGGCCATGATCGGAGAGGCTG TGCGTCGCTCACTGGCGAGCGAGGCGGGCATCGACTTCCATTTCTGTTCCGATCCGCAGCAGGCGGTGGCGGTGGCCAACCAGATCAAGCCGACGGTGAT CCTCCAGGACCTGGTGATGCCCGGCGTCGACGGCCTCACGCTGCTCGCTGCCTACCGCGGCAACCCGGCGACCCGCGACATCCCGATCATCGTCCTGTCG ACCAAGGAAGAGCCGACGGTGAAGAGCGCGGCGTTCGCCGCCGGCGCCAACGACTACCTGGTCAAGCTGCCTGACGCCATCGAGCTGGTGGCGCGGATCC GCTACCACTCGCGTTCGTACATCGCCCTGCAGCAACGCGACGAGGCCTATCGGGCGCTGCGCGAGAGCCAGCAGCAGTTGCTGGAGACCAACCTGGTGCT GCAGCGGCTGATGAACTCCGACGGCCTGACCGGGCTCTCCAACCGTCGTCACTTCGACGAATACCTGGAGATGGAGTGGCGCCGCTCGCTGCGCGAGCAG TCGCAACTGTCGCTGCTGATGATCGACGTGGACTATTTCAAGAGCTACAACGACACCTTCGGCCACGTCGCCGGCGACGAGGCCCTGCGCCAGGTCGCCG GGGCCATCCGCGAGGGCTGCAGTCGCTCCTCGGACCTGGCGGCTCGGTACGGCGGCGAGGAGTTCGCCATGGTCCTCCCGGGCACCTCGCCGGGCGGCGC ACGGTTGCTGGCGGAGAAGGTCCGGCGCACGGTGGAGAGCCTGCAGATCAGCCACGACCAGCCACGCCCGGGCTCGCACCTGACCGTCAGCATCGGCGTC AGCACCCTGGTGCCGGGCGGCGGCGGGCAAACCTTCCGGGTTCTCATCGAGATGGCCGACCAGGCGCTCTACCAGGCCAAGAACAATGGCCGCAACCAGG TCGGCCTGATGGAACAGCCGGTGCCGCCGGCCCCGGCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCGCGCGGCGGCCATGCGTCGCCGGCCGGCATTAAATAGAGGCCGGCGTACTGCCTGTGGGGCGCAAGTGCAGTATACTTCGCAGCTTTTCGACGTT TTCCCGCGAGTGAGCGCCAGCCATGGAAATCAACCCGATCCTCAACAGCATCAAGGACCTCTCCGAGCGCACCCAGACCATTCGGGGGTATCTTTGACTA CGATCAGAAGCATGATCGCCTGGTCGAAGTAAACCGCGAGCTCGAAGACCCCAACGTCTGGAACAACCCCGAATACGCCCAGAACCTCGGCCGCGAGCGC GCCCAGCTGGCGCAGGTGGTGGAAACCCTGGACGACCTGACCAGCGGCCTGGCCGACTCCCGCGACCTGCTGGACATGGCGGTCGAGGAAGACGACGAGG GTGCCGTCGACGACGTTGCCAACGAAGTCGAGCGTCTGCGCGAGATCCTCGAGAAGCTGGAGTTCCGCCGCATGTTCAGCGGCGAGATGGACCCGAACAA
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Amino Acid Sequence |
>diguanylate cyclase
MHNPHESKTDLGAPLDGAVMVLLVDDQAMIGEAVRRSLASEAGIDFHFCSDPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLS TKEEPTVKSAAFAAGANDYLVKLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQ SQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGV STLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQPVPPAPAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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