Pseudomonas aeruginosa AZPAE14352, NQ48_RS27175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14352 AZPAE14352_contig_37, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGCTCACCACCAACGCCGGCACCGAGATGATCGCCAGCCTCTGCGCCGATCCGGAACTGATGCCCGAGCCGGAAGCCATCGCCAAGTCGCTGCGCGAA CCGCTGCTGAAGATCTTCCCGCCGGCGCTGCTCGGCCGCCTGGTGACCATCCCCTACTACCCGCTCAGCGACGACATGCTCAAGGCCATTTCGCGCCTGC AACTGGGGCGGATCAAGAAGCGCGTGGAGGCGACCCACAAGGTGCCGTTCGAGTTCGACGAGGGCGTCGTCGACCTGATCGTCTCGCGCTGCACCGAGAC CGAGAGCGGCGGCCGGATGATCGACGCGATCCTCACCAACACGCTGTTGCCGGACATGAGCCGCGAGTTCCTCACCCGCATGCTCGAAGGCAAGCCGTTG GCCGGGGTACGTATCAGTAGCCGCGACAACCAGTTCCACTACGACTTCGCCGAGGCCGAGTGACAACCGGCGACACGCAGAGCAGTAGAAGGAACCGTCG
DNA Sequence for Gene
>NQ48_RS27175
ATGGGATTGATGCAACTGACCCGCCTGGTCCAGGTGGATTGCCCGCTGGGGCCGGACGTGCTGCTGTTGCAGCGCATGGAGGGACGCGAGGAACTGGGAC GGCTGTTCGCCTACGAGCTGCACCTGGTATCGGAAAATCCCAACCTGCCGCTGGAGCAGTTGCTCGGCAAGCCGATGAGCCTGTCGCTGGAGCTGCCCGG CGGCAGCCGGCGCTTCTTTCACGGCATCGTCGCGCGCTGTAGCCAGGTGGCCGGGCACGGCCAGTTCGCCGGCTACCAGGCCACCCTGCGGCCCTGGCCG TGGCTGCTGACGCGCACCTCGGACTGCCGCATCTTCCAGAACCAGAGCGTGCCGGAGATCATCAAGCAGGTGTTCCGCGACCTCGGCTTTTCCGATTTCG AGGATGCCCTCACGCGCCCCTACCGCGAGTGGGAATACTGCGTGCAGTACCGCGAGACCAGCTTCGACTTCATCAGCCGGCTGATGGAACAGGAGGGCAT CTACTACTGGTTCCGCCATGAGCAGAAGCGCCACATCCTGGTGCTCTCCGACGCCTACGGCGCGCATCGCAGCCCGGGTGGCTACGCCAGCGTGCCGTAC TACCCGCCGACCCTCGGCCATCGCGAGCGCGACCACTTCTTCGACTGGCAGATGGCACGCGAGGTCCAGCCCGGTTCGCTGACCCTCAACGACTACGACT TCCAGCGCCCCGGCGCGCGCCTGGAGGTGCGTTCGAACATCGCCCGGCCGCACGCGGCGGCCGACTACCCGCTGTACGACTATCCCGGCGAATACGTGCA GAGCCAGGACGGCGAGCAGTACGCGCGCAACCGCATCGAGGCGATCCAGGCGCAGCACGAGCGCGTGCGCCTGCGCGGCGTGGTGCGCGGGATCGGCGCC GGGCACCTGTTCCGCCTGAGCGGCTATCCGCGCGATGACCAGAACCGCGAGTACCTGGTGGTCGGCGCCGAATACCGGGTGGTCCAGGAACTCTACGAAA CCGGCAGCGGCGGCGCCGGCTCGCAGTTCGAGAGCGAGCTGGACTGCATCGACGCCAGCCAGTCGTTCCGTCTCCTGCCGCAGACTCCGGTACCGGTGGT GCGGGGTCCGCAGACTGCGGTGGTGGTCGGGCCCAAGGGCGAGGAGATCTGGACCGACCAGTACGGCCGGGTCAAGGTGCACTTCCACTGGGATCGCCAC GACCAGTCGAACGAGAACAGCTCCTGCTGGATTCGCGTGTCCCAGGCCTGGGCCGGGAAGAACTGGGGTTCGATGCAGATCCCGCGGATCGGCCAGGAAG TGATCGTCAGCTTCCTCGAAGGCGACCCGGACCGGCCGATCATCACCGGGCGGGTCTACAACGCCGAGCAGACGGTGCCCTACGAGCTGCCGGCGAACGC CACCCAGAGCGGGATGAAGAGCCGTTCGAGCAAGGGCGGCACGCCGGCCAACTTCAACGAGATCCGCATGGAGGACAAGAAGGGCGCCGAGCAGTTATAC ATCCACGCCGAGCGCAACCAGGACAACCTGGTCGAGAACGATGCCTCGCTGTCGGTCGGCCACGACCGCAACAAGAGCATCGGCCACGACGAGCTGGCGC GCATCGGCAACAACCGCACCCGCGCGGTGAAGCTCAACGACACCCTGTTGGTGGGCGGGGCGAAGAGCGACAGCGTCACCGGCACCTACCTGATCGAGGC CGGCGCGCAGATCCGCCTGGTCTGCGGCAAGAGCGTGGTGGAGTTCAACGCCGACGGCACCATCAATATCTCCGGCAGCGCCTTCAACCTCTACGCCAGC GGCAACGGCAACATCGACACCGGCGGCCGCCTCGACCTCAATTCCGGCGGCGCCAGCGAGGTCGACGCCAAGGGCAAGGGCGTGCAGGGCACCATCGACG GCCAGGTACAGGCGATGTTTCCGCCGCCGGCGAAGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGGCGGCATCCTGGCTGCCCGCCCTTGGGCGGGACGCCGCGGGAGCCTTGACGATTCGCGCATGTCCTCGCCAGGCAGAAGCGGCGGTCGCTCAAGAC CGATGGTGTTGCGCTCAGGGCAGATCGACTTTCAGGCCGCGGCCAGTGCGTATACCGACGTAGTAGGCGTCCTTGAGGGCCCTGGAGAGTTCCGGGTCGG TTTCGTCGAATTCCTTCACGGCGATGCTGCCGAGGGTCAACCGGTGCAGTGCGGAACGATCCAGGCTGCGGTCGAGCAGGACGGACCTGATGTACTGCAA TTGCTTTTCCGCGGACAGCAGGACCTCGTATCCCGGATAGCGGGCCAGCCGGTCGACGACCAGCGCCAGAGCGCGGTCGATGTATTCGATGGGTGTCATG ATCCCTCCCGGGGAAGCAGACCGAAGGAGCCTTTCTCGTTGGAGAACAGTTGTTGCGCGCCGCCTTTGGCGGGATATGACTGTCCCTTTACCGACCAGAA
Amino Acid Sequence
>type VI secretion protein ImpA
MGLMQLTRLVQVDCPLGPDVLLLQRMEGREELGRLFAYELHLVSENPNLPLEQLLGKPMSLSLELPGGSRRFFHGIVARCSQVAGHGQFAGYQATLRPWP WLLTRTSDCRIFQNQSVPEIIKQVFRDLGFSDFEDALTRPYREWEYCVQYRETSFDFISRLMEQEGIYYWFRHEQKRHILVLSDAYGAHRSPGGYASVPY YPPTLGHRERDHFFDWQMAREVQPGSLTLNDYDFQRPGARLEVRSNIARPHAAADYPLYDYPGEYVQSQDGEQYARNRIEAIQAQHERVRLRGVVRGIGA GHLFRLSGYPRDDQNREYLVVGAEYRVVQELYETGSGGAGSQFESELDCIDASQSFRLLPQTPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRH DQSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLY IHAERNQDNLVENDASLSVGHDRNKSIGHDELARIGNNRTRAVKLNDTLLVGGAKSDSVTGTYLIEAGAQIRLVCGKSVVEFNADGTINISGSAFNLYAS GNGNIDTGGRLDLNSGGASEVDAKGKGVQGTIDGQVQAMFPPPAKG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site