Pseudomonas stutzeri A1501, PST_0537

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00563 EAL domain IPR001633 EAL domain 454 688 4.1E-75
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 451 707 1.1E-98
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 453 702 1.57E-89
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 285 439 2.35E-42
SMART SM00052 duf2_2 IPR001633 EAL domain 448 693 1.0E-109
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 276 435 5.3E-37
Pfam PF03707 Bacterial signalling protein N terminal repeat IPR005330 MHYT domain 131 185 5.2E-13
SMART SM00267 duf1_3 IPR000160 GGDEF domain 269 438 1.8E-50
Pfam PF03707 Bacterial signalling protein N terminal repeat IPR005330 MHYT domain 199 260 1.6E-5
Pfam PF03707 Bacterial signalling protein N terminal repeat IPR005330 MHYT domain 68 122 1.4E-15
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 274 450 1.6E-49
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 449 702 7.5E-89
CDD cd01949 GGDEF IPR000160 GGDEF domain 281 434 4.0331E-51
CDD cd01948 EAL IPR001633 EAL domain 454 693 4.76631E-103
PANTHER PTHR33121 CYCLIC DI-GMP PHOSPHODIESTERASE PDEF - - 205 702 0.0
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 280 434 2.6E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.