Pseudomonas stutzeri A1501, PST_0498
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGAAAGTGGACACCGTCAGGCCGCGCGCCTCGCTGCCCTTGAGCAGGGTGCCGACGCGCTCCTTCATCTCCCGGGCCGCCTTGTTGGTGAAGGTCATGGC GACGATGTGACGGGCCTGGATGCCGCAGTTCTGCACCAGGTGGGCGATCTTGCGGGTGATCACGCTGGTCTTGCCGGAGCCGGCACCGGCGAGCACCAGC AGGGGGCCGCCGACGTAGTTCACGGCTTCCTGCTGCCGAGGATTGAGTCGGGACATGTTGTTCAGGTCGTTCGAAACGGGGGCGCGAGTTTAACAGGCCG AAAGGGTGATGCAGGCGCGTTACAGACGCAATAAAACGCCGGTCGTCGCGCGTGGGGCTTGGCTAATGGCAAGAATCGATTAGTCTTGTCGCGCTGCAGG ATGCTGGGGTGGTTGCACAGGGACTGGTGGGATCGGAGACCCTTTGGTGTCTTCAACAGCTCAAGAGTCCGGAGGCCGCTTGCCAGCGCCTGCCCAACCC
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| DNA Sequence for Gene |
>PST_0498
ATGCCATTGTTGCTGTTGGCGCATCGCCCAGACTGGGCGGTGCGGCTGCGCGCCTGCCTGCAGGATTCGGCCCACGCCGAACAGCTGGTCGTGGCGACGG ACTGGCAAACCGTCAGCCAGCAGCTCGAATCTCCCTGTCTGGTCCTGGCGACGCCGCAATGCCGGCCCGCGCCCGGGCGCTTTCCCTGGCCGCTGATCCT GCTGCTCGACGAGGAGCCGGAAGAAACCCCGGAAGGTGCGGTCGACTGGCTGGTGGCCGACCAGCTCAGCGCCGAGGTGCTGCGCCGTTGTCTGCGCTAC GTGCGCGAGCGCTGCAACCTGCAGGGCACCCTGCAGAAGCTTGCGGTGCGCGACCCGCACACCGGCATCGCCAATCGTCAGGGCTTCCAGGCGCAGCTGC TCGACGCCCTGAGCGAGCACGACGGTCATGGCCTGGAGCTCGGCTACCTGGACCTGGACAATTTCCGCCACGTCAACGACGCCCTCGGCCACGATGCCGG AGATCGCTTGATCCTGCAGGTGGTCGCCCGGCTCAAGGCGCAGCTGGAAGTGGGCGATCTGCTGGCGCGGCTGGGTGGCGACGAGTTCGCCTTGCTGCTC GACACCCGTGACGATGCCGGGCGCGCCGATGCGATCGCCGATCGCATCGTCGAGGCGCTGGCCGAACCCTACTGGGTGGACGGTGAAAGCCTGATGCTCG GCTGCAGCCTCGGGCTGGCGCGAGCCAGCGCCGGCACCTCGGCCGATGCGCTGCTCTGGCATGCGCAACTGGCGATGCGTCAGGCCAAGGCCAGCCAGGG CTGCACCTGGTGCCTGTACGACGAGCACGTCAGCCGCAGTGCCCGCAGCCTGGCCGACCAGGAGGGCGAGTTGCGCCGCGCGCTGCGCCGTGGTGAGCTG GAGCTGCACTACCAGCCGCGGCTGTGTCTGGACACGGGCCGCGTGGTCGGCATCGAGGCGCTGGTGCGTTGGCTGCATCCCGAACGCGGTCTGCTCGGGC CGGACGCCTTCATTCCCATGGCCGAGGAAAGCGGCCTGATCGTGCCGCTCGGCTACTGGGTCATCGCCCGCGCCCTGCGCGACCTGCAGAGCCTGCACGA GCAGGGTGCGGACTCGCTGCACATGGCGGTCAACCTGTCGTTCCGGCAGTTCCAGGACAGCCAGTTGCTGCCGACACTGACGCGGCTGATCGACGAGCGC GCCATCGATCCGCACTGGCTCGAGTTCGAGCTTACCGAAACCGCCGTCATGCGCCGCAGCGAGCAGGTGCAGACCGCCATGCAGGCGCTTGGCCAGCTGG GCGTGCGCTTCTCGCTGGATGACTTCGGCACCGGCTTTTCCTCCTTCGTGCACCTGTCCAACCTGCCGATCACGCTGCTCAAGATCGACAAGAGCTTCGT CGCCAGCATGGGCGCCCGCCCGGAAAAGCGGCAGCTGGTGGAGGCGATGGTCGGGCTGGCGCACAACCTGCGGCTGGAGGTGGTGGCCGAGGGCGTGGAA ACCGCCGAGCAGCTGGAGCTGCTGCGCCAGTTTGGTGCGCAGCAGGTTCAGGGCTATCTGGTCAGCCAGCCGTTGCCGCTGGCCGAACTGCTTAGCTTCA TGAGCGCCGAGCGCCAGACCGCCGGCCTGGCGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGAGGCGCCCCGGCACTACGGCCGGGACGCGCCGCCATCAGCGCACCATGTGCAGGAAGTGCATGTGCTTCTCGTACTGGCCGAGGATGTCGCCAATG ACGTCTTCGCGGCTCCAGCCCATCACGTCGTAGTCCTGGCCGCCTTCCTTGAGATGCACCTCGGCGCGGAAGTACTTGCGCTCCTCACGCTCGTCGTCCT CGCTGGTCACCACGAAGCTGGGCATGGCGTAGGCGCGCGGGCGTACCTCGTAGATGAAGTCCGGCTCGCCTTCGTGGGTGATCTCGAAGCGCAGGCGGCG GTCTTCGCCTTCGCTGATCTCCACCTCGTAGCCCTGCTTGCGCATTTCTTCGGCGATGGCCTCGTAGGCCGGACGCACCACCTCGGCGATGAAGCGCACC ACATGGGCGCGCCGCGGGAACAGCATCAACGTGCGCAGGCGCCGTTGCCAGCCTCCGGCCGTTGGTGCTGCGCTCGGCGAGATGCTCAGCGCCTGATAAC
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| Amino Acid Sequence |
>diguanylate cyclase
MPLLLLAHRPDWAVRLRACLQDSAHAEQLVVATDWQTVSQQLESPCLVLATPQCRPAPGRFPWPLILLLDEEPEETPEGAVDWLVADQLSAEVLRRCLRY VRERCNLQGTLQKLAVRDPHTGIANRQGFQAQLLDALSEHDGHGLELGYLDLDNFRHVNDALGHDAGDRLILQVVARLKAQLEVGDLLARLGGDEFALLL DTRDDAGRADAIADRIVEALAEPYWVDGESLMLGCSLGLARASAGTSADALLWHAQLAMRQAKASQGCTWCLYDEHVSRSARSLADQEGELRRALRRGEL ELHYQPRLCLDTGRVVGIEALVRWLHPERGLLGPDAFIPMAEESGLIVPLGYWVIARALRDLQSLHEQGADSLHMAVNLSFRQFQDSQLLPTLTRLIDER AIDPHWLEFELTETAVMRRSEQVQTAMQALGQLGVRFSLDDFGTGFSSFVHLSNLPITLLKIDKSFVASMGARPEKRQLVEAMVGLAHNLRLEVVAEGVE TAEQLELLRQFGAQQVQGYLVSQPLPLAELLSFMSAERQTAGLAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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