Pseudomonas aeruginosa AZPAE14352, NQ48_RS02805

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 283 381 3.77E-8
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 480 579 1.45E-5
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 569 703 1.11E-16
Pfam PF13426 PAS domain IPR000014 PAS domain 865 966 1.5E-16
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 842 965 4.89E-22
CDD cd00130 PAS IPR000014 PAS domain 862 964 2.54517E-9
SMART SM00086 pac_2 IPR001610 PAC motif 803 845 7.4E-4
Gene3D G3DSA:3.30.450.20 PAS domain - - 714 855 2.7E-21
MobiDBLite mobidb-lite consensus disorder prediction - - 1 20 -
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 581 712 1.9E-10
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 970 1136 1.5E-40
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 857 968 3.9E-16
Pfam PF00563 EAL domain IPR001633 EAL domain 1154 1389 2.1E-77
CDD cd00130 PAS IPR000014 PAS domain 594 702 2.65792E-8
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 976 1144 2.3E-63
Gene3D G3DSA:3.30.450.20 PAS domain - - 280 417 1.4E-8
SMART SM00091 pas_2 IPR000014 PAS domain 717 784 0.83
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 707 843 1.82E-14
SMART SM00091 pas_2 IPR000014 PAS domain 853 920 6.1E-8
Gene3D G3DSA:3.30.450.20 PAS domain - - 856 975 8.8E-29
CDD cd01949 GGDEF IPR000160 GGDEF domain 974 1136 2.26633E-62
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 1149 1403 1.4E-106
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 978 1139 3.53E-50
CDD cd01948 EAL IPR001633 EAL domain 1154 1394 2.33607E-112
SMART SM00091 pas_2 IPR000014 PAS domain 292 358 0.025
Pfam PF13426 PAS domain IPR000014 PAS domain 729 844 3.9E-6
Coils Coil Coil - - 49 69 -
SMART SM00086 pac_2 IPR001610 PAC motif 662 705 0.0065
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 1149 1403 1.6E-104
Pfam PF08447 PAS fold IPR013655 PAS fold-3 608 699 4.3E-14
MobiDBLite mobidb-lite consensus disorder prediction - - 1 18 -
SMART SM00091 pas_2 IPR000014 PAS domain 584 653 1.7E-5
CDD cd00130 PAS IPR000014 PAS domain 726 842 1.42944E-5
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 1153 1400 5.1E-92
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 968 1140 5.3E-45
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 849 1400 0.0
SMART SM00086 pac_2 IPR001610 PAC motif 925 967 1.2E-5
SMART SM00052 duf2_2 IPR001633 EAL domain 1148 1394 4.5E-126
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 713 852 1.2E-10
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 973 1134 1.2E-51
Gene3D G3DSA:3.30.450.20 PAS domain - - 419 576 6.4E-5
SMART SM00267 duf1_3 IPR000160 GGDEF domain 962 1138 3.8E-69
Pfam PF13188 PAS domain IPR000014 PAS domain 305 349 0.023
Gene3D G3DSA:3.30.450.20 PAS domain - - 577 703 1.0E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.