Pseudomonas aeruginosa AZPAE14352, NQ48_RS18525

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14352 AZPAE14352_contig_16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAGGCTACAGCCATGTGCTCAACGGGCGCTTCAAGGGCGGCCACATCACCCGCCACTACGGCCAGCCGGAGCAGCACGTCCATGCCGTCCAGCTGGAGCT GGCGCAGTGCACCTACATGGACGAGCAGGCCCCGTTCGCTTACCGCGCGGACCTCGCCGAAGCGACCCGCGCAGTCATCCGCGAACTGCTGGAAAGCCTC CTCGCCTGGGGTCGCGAGCGCTACGCCTGAGGTGCTCGGAGGCGGCGGACGCCTGGCCCGTCCTGGCGGACGTGAATGCCGCGGATGGGGTGGGGCGTCC GTGTCGGCATTCTGGAAATTTTCTGTTACAAATTTATTGAGGTCAGCGTTGATGCGGCCGGGAGGCCGAGTGCGCAAAGAGTTGCACAACTGTTCTCCTC TATCCTCTCGGCCAGCATTTCCATCGCGCGGGCGCAGGCGCGTCGCGCCCGGAACCGAATACGCCAGGAACGCACGGCTGCGTTTCCAAGAGGACAGTGA
DNA Sequence for Gene
>NQ48_RS18525
ATGTTCGCCCCCGCCAACCAGACGCACTTCAGCCTTCGCATCGAAAACCTCCGGCACGACTTCCAGGTACTCGCCTTCCGCGGTCGCGAAGCCATCAGCC AGCCCTTTCGCTTCGACCTGGAGCTGGTCAGCGAGCGATCCGATCTGGACCTCGACGCGCTGCTGCACCAGCCGGCCTTCCTGATCCTCTCGCCGAGCGG GCAAGGGGTCCACGGACAGCTCACCAGCATCGCCCAGGGGGACTCCGGCAAGCGCCTGACCGGCTATCGCGCGACCCTGGAGCCGCGCCTGGCCTACCTG GGGCTGTGCAGCGACCAACGCATCTTCCAGCGCCTCAGCGTGCCGGAAATCATCGGTCGGGTGCTGGAGGGCCACGGCATTCTCGCCGACGCCTACCGCT TCCAGCTGGGCCCGACGCCGTACCCGGCCCGCGAATACTGCACGCAGTACGACGAAACCGACCTGGCGTTCCTCAGCAGGCTCTGCGAGGAGGAAGGCAT CCATTACCACCATGAGTTTTCTGCCCAGGGCCATATGCTGGTCTTCGGCGACGACCAGACCTCCTTTCCGCGGCTGCAACGCCCCGTCGCCTACGTGCAG GACGCCGGGCTGGTCGCCGACCAGCCGGTGGTCAAGCGCTTCGGCGTGCGCTTCGACACCCGTGCCAGCCGGGTTACCCGGCGCGACTACGACTTCGAGC AACCCGCGTTGCAGATGCAGGCCGCCCATGGCCCGCAGCCCGGGGCGCAGCAACCGGACCTGGAGGACTACGACTATCCCGGCCGCTTCACCCACCGCGA GCGCGGCAAGCACCTGAGCCGGCGCGCGCTGGAACGGCATCGCGCCGACTACCTACAGGCCAGGGGCGAAAGCGACGAACCGGCGCTGCTCAGCGGACAC TTCCTGACGCTGTCCGCGCATCCCCGCGGCGAATGGAACGATCTCTGGCTGCTTACCGAGGTTCTCCACGAAGGGCGGCAGCCGCAGGTACTGGAAGAGT CGATCGACAGCGACGTCGCGCAGGGCCGGGGCGATTTCCGCCAGGGCTATCGCAACCGTTTCGTCGCCACTCCCTGGAGCGCGCATTTCCGGCCCCCGCT GGAGCATCCCAGGCCACGCCTGCTGGGCTGCCAGACAGCGGTCGTGACCGGCCCCACCGGCGAGACCATCCACTGCGACCAATACGGCCGGGTCAAGGTG CAGTTCTTCTGGGATCGCCTCGGCCAGGCCGACGACAACACCAGTTGCTGGTTGCGCGTCGCCTCCAACTGGGCGGGCAAACGCTATGGCGGCGTCGCCA TCCCGCGGGTGGGCATGGAAGTCCTGGTGGGTTTCCTGGAGGGCGATCCGGATCAGCCGCTGGTCACCGGCTGCCTCTACCACAGCGAAAACCGGGTGCC CTACGAGCTGCCGCAGAACAAGACCCGCAGCGTTTTCAAGACCGACAGCTACCCCGGCGGCGGCGGTTTCAACGAACTGCGCATCGAGGACCGCAAGGGC CAGGAACAGATCTTCGTCCACGCCCAGCGCGACTGGGACGAGAACATCGAGCACGACCAGAAGATCCGCGTCGGCCACGAGCGCCACGACACGGTCGAGG GCGATAGCTACAGCGAGTTCAGGGCCGAGGAACAGCGCACGGTCCATGCCGACCGCAAGGTCGAACTGAAGGCGGCCGACCACCTCAGCGTCGCCGACGC GTTGCACCTGAGGATCGGCACCGGCCAGTTCGTCGAGGCGGGCGACGAGATCCATTTCAAGGCCGGCGACAAGGTAGTGATCGAGGCAGGCATGGAGTTG ACCCTAAAGGGCGGTGGCAGCTTCGCCAGGCTCGACCCGGGCGGTGTCACCCTTGACGGCGCCCAGGTGATGATCAACAGCGGCGGCAGCCCCGGCATCG GTAGCGGCGTTCGCGCGCTGTCGCCGCTGCAACCGCTCGCGGCCGACGCCGCGGCGGCGGGAGGCGCCTTGTTGGGAGCCATCGCCCAGAAGGTCGGCGA AGCGCCGCAGAAACTCCTGCGTTTCGAACTCAGTCCGTTGCCCGGTGTGCCATCGGCGGCCAGGCAACCGTATCGGCTCTACGCCAATGGTGCCTTCAAG GAGGAGGGCATCGCCGACGAAGGCGGCGCAATCAGCTTCGAACCGCTGCCGGGCGAACGCACCTATCGCATCGAGACCGCCAATGGCCACGCCTACGAAG TGGAGATGGTCGACCAGCCGGACGCACTGCAGGCCGACGATCGGCTCGCCCAGCAGGGGTTCCGCGACTACCGGGCGGAAATGCCCCAGCACAAGCCGCG TTCCGCCCCGGACGCCTACCGGCGCGACGCCTCGCGGCCCGGCGCCGCCGACAAGGATGAGCCCACGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGACCTGTACAAACCGCAGACCCTCAAGCTATACGCGCAACAGGCCGGCAGCGTCCGGCTGACCCTCGACTGGTTCGCCAACAAGGCTTTCTACCCGCC GCGCGCGGGTGTGCACATCAAGCCGCTGATCAATGGCCAGGCGGCCTTCGACGCGGTGCATGCGGCGATGGAGGCGGCCCGGCACAGCATCGACATCATC ACCTGGGGCTTCGACCCGGCCATGCGTTTCAAACGCCCCGACGGACCGCGAATCGGCGAATTGCTGCAGACGAAGGGCCGCGAAGGAGTGCAGGCGCGAG TGCTGGTCTGGAGCAACCAACTCGCCAGGCTCAAGGAAAACACCATCCCCGGGGCCGGCGTCGGCGGTTCCGGCGGCACCTGGGCGGGCTCGGGCGTCGC CAGCGGCAGCGCGGTGGACAACGAGGTGCTGCGACTGGAGCAGCGGCGCCAGCATAACCTCAACCTCATCGCGCGGCAGCAGGAAGCCCTGGAGCGCTCG
Amino Acid Sequence
>type IV secretion protein Rhs
MFAPANQTHFSLRIENLRHDFQVLAFRGREAISQPFRFDLELVSERSDLDLDALLHQPAFLILSPSGQGVHGQLTSIAQGDSGKRLTGYRATLEPRLAYL GLCSDQRIFQRLSVPEIIGRVLEGHGILADAYRFQLGPTPYPAREYCTQYDETDLAFLSRLCEEEGIHYHHEFSAQGHMLVFGDDQTSFPRLQRPVAYVQ DAGLVADQPVVKRFGVRFDTRASRVTRRDYDFEQPALQMQAAHGPQPGAQQPDLEDYDYPGRFTHRERGKHLSRRALERHRADYLQARGESDEPALLSGH FLTLSAHPRGEWNDLWLLTEVLHEGRQPQVLEESIDSDVAQGRGDFRQGYRNRFVATPWSAHFRPPLEHPRPRLLGCQTAVVTGPTGETIHCDQYGRVKV QFFWDRLGQADDNTSCWLRVASNWAGKRYGGVAIPRVGMEVLVGFLEGDPDQPLVTGCLYHSENRVPYELPQNKTRSVFKTDSYPGGGGFNELRIEDRKG QEQIFVHAQRDWDENIEHDQKIRVGHERHDTVEGDSYSEFRAEEQRTVHADRKVELKAADHLSVADALHLRIGTGQFVEAGDEIHFKAGDKVVIEAGMEL TLKGGGSFARLDPGGVTLDGAQVMINSGGSPGIGSGVRALSPLQPLAADAAAAGGALLGAIAQKVGEAPQKLLRFELSPLPGVPSAARQPYRLYANGAFK EEGIADEGGAISFEPLPGERTYRIETANGHAYEVEMVDQPDALQADDRLAQQGFRDYRAEMPQHKPRSAPDAYRRDASRPGAADKDEPTP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site