Pseudomonas aeruginosa AZPAE14352, NQ48_RS16270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14352 AZPAE14352_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCCATCCGGAATGCGAGTGGGCGGACATAGGGTTCTCCTCGTCGTGGGAAACCCATGCTGGCCTGTCTTCGAGTATCCCGATATCGACCGGATGGTTG ATAGGTCGATATGCCACGGAAATAGCACGGAGCGGCGAAGGGAAAGTTATCGAAGATGAAGTCTTAGATGAGTTTTATTTTCTTCTTTTTTGGTTTTTTA GTTAATGGGTTGCTGTTCTTTTGTAAGTATTTTCTGAATTTATTCTTATGTGCCTATTGGCTGTTATCGGAAATGGACTACATATGTTTTCGTATGATTA TTATTTTTAAATCCTGTCTTTCTTTCTAGTGTTTGGGTCTGCGTTTATCAGGGCGCAATCTTCGGCTGTCGCGTAATGGTCGGAGGCGCTCTAGGCGGCC GTCCCGGTTGCGCGCAAAGGCTTGGCTACCTTGGCCGGTTCGTACTGCATCGGCTCTCCAGGGAGCAGCCAGGATGTTCCACAACTCCAAAGGAAATCAG
DNA Sequence for Gene
>NQ48_RS16270
ATGAACAAGTTCAAACGTGCAATTCTTGCGTCCCTCGTTGCGTCGGGCACCCTTCTCGCGCTGATGTCCCCCGTGGCCCATGCGGTCGATGGGATCGTCA ACTTCTCGGGCAACATCACCGACGTCGCGTGCGATATCAACGGCCAGGCGCCGGGTGCGGGCAACGTCACCAACGTCGACCTGGGTATCGTGGCGCCGAC CCATTTCACCGCCGTCGGAACCAACTCCACTTTCCAGGAGTTCGATCTGGTCCTCTCCGGTGCCGGCTGCACCAATGACAAGAAGGTTTCCATCGCCTTC GATCCGGTCACCAACGTCGACCGTATCAGCGGCAACCTGATGCTGATGGGGCCGTCGGAAGCCAAGGGCGTGCAGATCCAGATCTTCAACAATTCGGCGG CCAACACCACGAAGATCCCGCTGGGCTCGGTCGAGGCCGCCCCGCAGAAGGCAACCGTCCTGAAGAACACGGCGACCCTGAAGTACAAGGCCTCCTATGT GTCCACCGAGAAGACCGTGACCGCGGGTACCGGCCTGTCCCATATCCGCTACCTCTTGGCGTACGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCGGTCGACGGACGAAGAGGTGAGGCCATGGCGCCGCTAATGCATCGTTTTCATTCTTTCGTGGCGGCAAGCGCCGTGGCCATCGCCCTGTGCGTCG GAACGGCTCACGCCGGGCTGATCGCACAGGGCACTCGCGTCGTCTTTCCGGCCAGCGAGCGCGAGGTCACCTTGCGGGTCAGCAATACCTCCGGCACTCC CGTGCTGGCGCAAGCCTGGGTCGACGATGGCCGGCAGGACGTTCCCCCCGAGGAACTGCAGGTTCCCTTCAGTGTCACGCCGGCCGTGACGCGAGTGGAC CCCAATGGCGGCGCCGTATTGCGCATCGCCTACCTGAAGGCCCCGTTGCCGACGGATCGCGAATCGCTGTTCTGGCTGAATATCCTGGAAGTTCCGCCCA GGGACGAAGACGAAAACAATGCATTGCAGTTTTCCTTTCGTTCGCGCTTCAAACTCTTCTTTCGACCCAGCCAGTTGAAGAGTGTCGATTCGGCTGCCGG
Amino Acid Sequence
>fimbrial protein
MNKFKRAILASLVASGTLLALMSPVAHAVDGIVNFSGNITDVACDINGQAPGAGNVTNVDLGIVAPTHFTAVGTNSTFQEFDLVLSGAGCTNDKKVSIAF DPVTNVDRISGNLMLMGPSEAKGVQIQIFNNSAANTTKIPLGSVEAAPQKATVLKNTATLKYKASYVSTEKTVTAGTGLSHIRYLLAYE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site