Pseudomonas entomophila L48, PSEEN5431 (radC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGCCGGGGCGACGGCCACGGTGGCGTCGGTGGCCAGCACCAGGGTGGTCAGCAGGTCGTCGGCCATGCCCTGGGCCATGCGCGCCAGCAGGTCGGCGGT GGCCGGGGCAATCAGCACCAGGTCGGCCCACTTGGCCAGCTCGATATGGCCCATGGCCGCTTCGGCGGCGGGGTCGAGCAGGTCCAGGTGCACCGGGTGG CCGGACAGCGCCTGCAGCGTGAGCGGGGTGATGAACTCGGCGCCACCCCGGGTCATGACCACGCGCACCTGCGCGCCGTGTTCCAGGAGTCGGCGAATCA GCTCGGCGCTCTTGTAGGCGGCGATGCCGCCACCGACGCCGAGAACGATGCGCTTGCGATACAACCGCTGCATAGGCCTTGCCTTATTCCAGTGAAAGCG GGCGGCGACGACAGCTGCCTGCGGCAGATCGTCGCATTTTCGAAGCGAACTAGATTAACACAGCGCCCAAAAGGGCCGTAGTGGCAGGCGAGGAGGGGGG
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| DNA Sequence for Gene |
>PSEEN5431
|radC
ATGAACATCAGGGAATGGCCGGTGGAAGAGCGGCCGCGGGAGAAGTTGTTGAATCGCGGGGCGGGCAGTCTTTCCGATGCGGAGTTGCTGGCGGTGTTTC TTGGTTCGGGGGTGAAAGGGCGCAACGTGCTGGAGCTGGCACGTGGGCTGTTGGTGAAGTTTGGCGGGTTGCGGCAGGTGCTTGAGGCGGATCGGCAGGC GTTCCTTGGTGAGCTGGGGCTCGGGCCGGTCAGGTACAGCCAGTTGCAGGCCTTGCTGGAAATCGGGCGCCGGAACCTGGCGATGTCCATCGAGCGAGAG TCGGTCATGGACAACCCGTTGGCTGTGCGGCGCTACCTGAAGGCAATGCTGAGGCATGAGGCTAGCGAAGTGTTCGGCTGCCTGTTTCTGGACACTAAAC ACAGGCCTTTGGCGTTCGAGATCCTTTTCCGCGGCACAATCGACCGGGCAAGCATCTATCCAAGAGAGGTGGTGCGGCGGGCATTGCTGCATAACGCGGC GGCCCTAATCCTCTGTCACAACCACCCGTCGGGCAATTGCGAGCCGAGTCAGGACGATGTGCATCTGACGCTGATGCTCAAGCGCTCGCTGGCGTTGATC GATGTGCGGGTTGTGGACCATGTCATCGTCGGCGATGGCGAGCCGCTGTCGATGATTGAGCATGGGTGGTTGGCGGGTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTGCTGGATGCCTTGCTGGCCCCTTCGCCGGCCCTGCCACCCAGGTTTCAGCGACTCACCGAAACCTTGCTGAAATCCTGCCGCCCAAACGGGCTCACC TGATAACCCTCGACCCCTTGGCGCAGCAGCGCCGCCGCCGTCGGGTGCGCCAGCGGCAGCCACAGTGCCTGCTGCTGGATCAGCGTCTGCGCCTGCTGGT ACAGCCGGCTGCGCACGCTCTGGTCGTTGGTGGTGCGGCCGGCGTTGATCAGCTGGTCCAGGCGGTTGTCGCAGAACCGCGCGAAGTTGGTCCCGGACTT GACCGCCGCGCAGGCAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCATTGTCGCCGGCCCAGCCCATGAACAGCAGGTCATGCTCGCCGGCCTTGGCG CGGCGGATCAGCTCGCCCCACTCGATGGTGCGGATCTCGGCCTTGATGCCAACCTTCGCCAGGTCCGCCTGGAGCATCTGCGCCCCCAGGCTGGGGTTGG
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| Amino Acid Sequence |
>DNA repair protein RadC
MNIREWPVEERPREKLLNRGAGSLSDAELLAVFLGSGVKGRNVLELARGLLVKFGGLRQVLEADRQAFLGELGLGPVRYSQLQALLEIGRRNLAMSIERE SVMDNPLAVRRYLKAMLRHEASEVFGCLFLDTKHRPLAFEILFRGTIDRASIYPREVVRRALLHNAAALILCHNHPSGNCEPSQDDVHLTLMLKRSLALI DVRVVDHVIVGDGEPLSMIEHGWLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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