Pseudomonas entomophila L48, PSEEN5288
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCTGGCCGTCGATGGCGACCGTGACGCGGTGTTCAATGTCTATGAAGCACTGCTGGTGAAACCGCCCAGCGACGAGGGCGTCGTCGTCAGCCTGCTGG ACAACCCAGCGATCAAGGCCGAAGGCCGGGTCCGCGAGATCACCCCGACGGTGTCCGCCGAGAGCGGCACGGTGCAGGTCAAGGTCGCACTGCGTAACGT GCCCGCGGGCATGCAGTTGGGCTCGCCGGTCACTGCCACCGGCAACACCCAGGGCCGGCCCAGCATCGAGCTGCCCTGGGCGGCGCTGACCAAGGCGCTG AAAGAGCCGGCGGTATGGGTGGTGGGCGAGGGCGACAAGGTCGAGCTGCGCAAGGTCCAGGTGGCGCGCTACCTCACCGGCAAGGTGGTGATCGCCGACG GCATCAAGGGCGGCGAAACCGTGGTGGTGGGCGGGGGGCAACTACTGCACCCGGGCATGCAGGTCGAGAAGGTCAGCGCCAAGGACGGAGGAGCCGCGCC
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| DNA Sequence for Gene |
>PSEEN5288
ATGAAGCGCCAGCTGTTGATACTGTCCACCAGCCTGATGCTGGCCGCCTGCGGCGGTGAAGAGGTGCAGCCCGAGGCGACACGCCCGGTGTTGTCGACGC TGGTCGAGCCGCAGGTGCAGTCGCAACTGGGCCGCTTTGCCGGTGCCATTCAGGCCCGCTTCGAAAGTACCCTGGGGTTCCGGGTGTCCGGGCGCATCGC CCGGCGCTGGCTGGACGTGGGCGCCCGGGTTAATCCTGGCGACACCTTGGCCACCCTCGATCCAACCGATCAGCAGAACCAGTTGCGCGCCGCCGAAGGC GACCTGGCCAAGGTCCAGGCGCAATGGATCAACGCGCAAGCCAATGCCCGCCGCCAGCAGCAGCTTTACGACCGTGGCGTCGGCGCCCAGGCCCAGCTGG ACATCGCCCAGACCGACCTGAAGACCACCGGCGCCGCGCTGGAGCAAGCACGTTCGGCGGTCAGCCAGGCCCGCGACCAGCTCGACTACAGCACCCTGCG CACCGACCACGCGGCGGTGGTCACCGCCTGGCAGGCCGAGGCCGGACAGACCGTCAGTGCGGGCCAAGCGGTGGTCACCCTGGCCCGTCCCGACGTCAAG GAGGCGGTGATCGACCTGCCGATCCCTTTGGCCGAGCAATTGAACAAGGACCTCACCTTCACCGTCGCTTCGCAGCTCGACCCCAGCATCAACACCACCG CCACCCTGCGCGAGCTGGAGCCTCAGGCCGACGCCACCACCCGTACCCGTCGCGCCCGGTTGACCCTGGCCAGCACCCCCGATGCCTTCCATCTGGGCAC GGCGATCAGCGTCACCCTGTCATCGGCGGTGAGCCCACGCAGTCAGCTGCCGTTGACCGCGCTGCTCGAGCGCGACGGCAAGACCCAGGTGTGGGTGGTC GACCCGCAGCAGAAAACCGTGGCCGCCCGTGACGTCGCGCTGATCGGGCGAACCGCCGACAGCATTGTCCTGGCCTCCGGCGTGCAGCCCGGCGAGCGGG TGGTCACGGCCGGCGTGAACAGTCTCAAGCCCGGCCAGAAGGTCACCTTCGACGAGGACGCGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGGAAGCTTCAACCTCTCGGAATGGGCGCTGAAGCACCAGTCCTTCGTCTGGTACCTGATGTTCGTCGGCCTGCTGATGGGGATCTTCTCCTACTTCAA CCTCGGCCGTGAGGAAGACCCGTCCTTCACCATCAAGACCATGGTCATCCAGACCCGCTGGCCCGGCGCCACCCAGGACGAGACCCTGTACCAGGTCACC GACCGCATCGAGAAGAAGCTCGAGGAGCTTGATTCGCTCGACTACGTGAAAAGCTACACTCGCCCGGGCGAGTCCACCGTCTACGTCTACCTGCGCGACA CCACCAAGGCCAAGGACATCCCCGAGATCTGGTACCAGGTGCGCAAGAAGATCCAGGACATTCGCGGACAGTTCCCCGCAGGCATCCAGGGCCCTGGCTT CAACGACGAGTTCGGCGACGTGTTCGGCTCGATCTACGCCTTCACCGCCGACGGCCTCACACTGCGCCAGCTGCGCGACTATGTGGAAGTGGCGCGGGCC
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| Amino Acid Sequence |
>multidrug RND transporter, membrane fusion protein
MKRQLLILSTSLMLAACGGEEVQPEATRPVLSTLVEPQVQSQLGRFAGAIQARFESTLGFRVSGRIARRWLDVGARVNPGDTLATLDPTDQQNQLRAAEG DLAKVQAQWINAQANARRQQQLYDRGVGAQAQLDIAQTDLKTTGAALEQARSAVSQARDQLDYSTLRTDHAAVVTAWQAEAGQTVSAGQAVVTLARPDVK EAVIDLPIPLAEQLNKDLTFTVASQLDPSINTTATLRELEPQADATTRTRRARLTLASTPDAFHLGTAISVTLSSAVSPRSQLPLTALLERDGKTQVWVV DPQQKTVAARDVALIGRTADSIVLASGVQPGERVVTAGVNSLKPGQKVTFDEDAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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