Pseudomonas entomophila L48, PSEEN5161 (soxB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCCCCGGCGCCCAGGGCGGCCCGCTGATGCACGTGATCGCCGCCAAGGCGGTGTGCTTCAAGGAAGCGCTGGAACCCGGCTTCAAGGCCTACCAGAAGCA GGTCATCGAGAACGCCCAGGCCATGGCCCAGGTGTTCATCGAGCGCGGCTACGACGTGGTCTCCGGCGGCACCGACAACCACCTGTTCCTGGTCAGCCTG ATCCGCCAGGGCCTGACCGGCAAGGACGCTGACGCCGCCCTCGGCCGCGCCCATATCACCGTCAACAAGAACGCCGTGCCCAACGACCCGCAGTCGCCGT TCGTCACCTCGGGCCTGCGCATCGGCACCCCGGCCGTCACCACCCGTGGTTTCAAGGTCGCCCAGTGCGTGGCGCTGGCCGGCTGGATCTGCGATGTGCT GGACAACCTGGGCGACGCCGATGTCGAGGCCGATGTGGCCAAGAACGTCGCCGCCCTGTGCGCCGACTTCCCGGTCTACCGCTGAGTGGAGCAGAACACC
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| DNA Sequence for Gene |
>PSEEN5161
|soxB
ATGCAACGTTATTCAGGCTTCGGCCTCTTCAAGCACTCCCTCAGCCACCACGAGAACTGGCAGCGCATGTGGCGCACGCCGACCCCGAAAAAGGTCTACG ACGTGGTCATCGTCGGCGGTGGCGGCCATGGCCTGGCCACGGCCTACTACCTGGCGAAAGAGCACGGCATCACCAACGTGGCGGTGGTCGAGAAGGGCTA CCTGGGCGGCGGCAACACCGCCCGCAACACCACCATCGTGCGCTCCAACTACCTGTGGGACGAGTCGGCGCACCTGTACGAGCACGCCATGAAGCTGTGG GAAGGGCTCTCGCAAGACATCAACTACAACGTGATGTTCTCCCAGCGCGGCGTGTACAACCTGTGCCACACCCTGCAGGACATCCGTGACTCCGAGCGCC GGGTCAACGCCAACCGCCTCAACGGCGTGGACGGCGAGCTGATCCGTACCGAGCAGGTCGCGGCTGAGATCCCGTACCTCGACTGCTCGAAGAACACCCG CTACCCGATCCTCGGCGCCACCGTGCAACGGCGTGGCGGCGTGGCCCGTCACGACGCCGTGGCCTGGGGCTTCGCCCGCGCCGCCGACGCCCTGGGCGTG GACCTGATCCAACAGACCGAAGTGATCGGCTTCCGTAAAGAGAACGGCGCCGTGATTGGCGTTGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCG GCGTGGTCACTGCCGGCAACTCCGGCCACATGGCCAAGCTGGCCGGCTTCCGCCTGCCGCTGGAATCGCACCCGTTGCAGGCACTGGTATCGGAGCCGAT CAAGCCAATCATCGACAGCGTGATCATGTCCAACGCCGTGCACGGCTACATCAGCCAGTCCGACAAGGGCGACCTGGTGATCGGCGCCGGTATCGACGGT TGGGTCGGCTACGGCCAGCGTGGCTCCTACCCGATCATCGAGCACACCCTGCAGGCGATCGTCGAGATGTTCCCGATCCTCTCCCGGGTGCGCATGAACC GCCAGTGGGGCGGCATCGTCGACACCACCCCCGACGCCTGCCCGATCATCTCCAAGACCCCGGTGAAGAACATGTTCTTCAACTGCGGCTGGGGCACCGG CGGCTTCAAGGCCACCCCGGGTTCGGGCAACGTCTTCGCCGCGAGCCTGGCCAAGGGCGAGATGCACCCGCTGGCCGCGCCTTTCTCCATCGACCGTTTC TACAACGGCGCGCTGATCGACGAACACGGCGCCGCTGCCGTCGCCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGGAGACAACCGTCATGTTGCAAATCTTCTGTCCCCACTGCGGCGAGCTGCGCTCCGAGGAAGAGTTCCACGCATCGGGCCAGGCGCACATCGCCCGC CCGCTGGACCCCAATGCCTGCTCCGACGAGGAGTGGGGCACCTACATGTTCTTCCGTGACAACCCACGCGGTATCCACCACGAGCTGTGGGACCACGTCG CCGGCTGCCGCCAGTACTTCAACGTCACCCGCGACACCGTGACCTACGAGATCCTGGAAACCTACAAGATCGGCGAGAAGCCGCAGGTCACCGCCACCTC GAAACAGAGCACCGCGCCAGCGACCGCCAAGGGCCAAGGGGAAAAAGTATGAGCCAGACCTATCGCCTCGCCAGCGGCGGCCGTATCGACCGCAGCAAGG TGCTGAACTTCAGCTTCAACGGCAAGACCTACCAGGGCTATGCCGGCGACACGCTGGCCGCCGCGCTGCTGGCCAACGGCGTCGACATCGTCGGGCGCAG
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| Amino Acid Sequence |
>sarcosine oxidase subunit beta
MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVVEKGYLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLW EGLSQDINYNVMFSQRGVYNLCHTLQDIRDSERRVNANRLNGVDGELIRTEQVAAEIPYLDCSKNTRYPILGATVQRRGGVARHDAVAWGFARAADALGV DLIQQTEVIGFRKENGAVIGVETNKGFIGAKRVGVVTAGNSGHMAKLAGFRLPLESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG WVGYGQRGSYPIIEHTLQAIVEMFPILSRVRMNRQWGGIVDTTPDACPIISKTPVKNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSIDRF YNGALIDEHGAAAVAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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