Pseudomonas entomophila L48, PSEEN5066 (phaC1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AACTGACCTTCGACGACGGCCATGACTCCGGATTGTTCACCTGGGAGTACCTCGAGCAACTGTGCCTGCGCCAGGAGCAATTGTGGGCCGAGTATCTGGA CGAACTGCACAAGGCCGGCAAATCCCGCGACCCGTCGGAATCGGTCGTGAAACTGATGCTCTAGCTCAAGCCCCCCACGCTTTAGAGCGCATTTTCTAAT CTCATCTGCTTGAATGCCTGGATGGCAGCCAAAGACTGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGAGCTGGCAAGTTCCCTGCATCGC TTTTCGCGTAAGCAGGGCCAGGCCGGTAGGTAGAGGTCGCGAGCGAAAGCAGGCTGTCTTCACACGCAGAAAATCCCGCCGCTCATCACTAACACGCCTC CGGTCGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTGTCACAGCACACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG
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| DNA Sequence for Gene |
>PSEEN5066
|phaC1
ATGAGTAACAAGAACAACGATGAGTTGCAGCGGCAGGCCTCGGAGAACACCCTGGGGCTGAACCCGGTCATCGGCATTCGCCGTAAGGATCTGCTGACCT CGGCGCGCACAGTATTGCGCCAGGCATTGCGTCAACCGCTGCACAGCGCCAAGCACGTGGCGCATTTCGGCCTTGAACTGAAGAACGTGCTGCTGGGCAA ATCGAGCCTCCAGCCTGAAAGCGATGACCGTCGCTTCAGCGACCCGGCCTGGAGCAACAACCCGCTGTACCGCCGCTACCTGCAGACTTACCTGGCCTGG CGCAAGGAGCTGCACGACTGGATCGGCGAAAGCGACCTGTCGCCCCAGGACATCAGCCGCGGCCAGTTCGTCATCAACCTGATGACCGAAGCCATGGCGC CCACCAACACCCTCTCCAACCCCGCCGCGGTCAAGCGCTTCTTCGAGACCGGCGGCAAGAGCCTGCTCGACGGCCTCTCCCACCTGGCCAAGGACCTGGT CAACAACGGCGGCATGCCCAGCCAGGTGAACATGGAAGCCTTCGAGGTGGGCAAGAACCTGGCCACCAGCGAAGGCGCTGTGGTGTACCGCAACGACGTG CTGGAGCTTATCCAGTACAGCCCGATCACCGAACAGGTGCACGCCCGCCCCCTGCTGGTGGTGCCGCCGCAGATCAACAAGTTCTACGTCTTCGACCTGA GCCCGGAAAAGAGCCTGGCGCGCTTCTGCCTGCGCTCCCAGCAACAGACCTTCATCGTCAGCTGGCGCAACCCGACCAAGGCACAGCGCGAGTGGGGCCT GTCGACCTACATCGATGCGCTGAAAGAGGCGGTCGACGCGGTGCTGGCGATCACCGGCAGCAAGGACCTGAACATGCTCGGCGCCTGCTCGGGCGGCATC ACCTGCACCGCACTGGTGGGCCATTACGCGGCGCTCGGTGAGAAGAAGGTCAACGCCCTCACGCTGCTGGTCAGCGTGCTCGACACCACGGTCGACACCC AGGTGGCGCTGTTCGTCGACGAGCAGACACTGGAAGCAGCCAAGCGCCACTCCTACCAGGCCGGCGTGCTCGAAGGCAGCGACATGGCCAAGGTGTTCGC CTGGATGCGCCCCAACGACCTGATCTGGAACTACTGGGTCAACAACTACCTGCTGGGCAACGAGCCGCCGGTGTTCGACATCCTGTTCTGGAACAACGAC ACCACGCGCCTGCCGGCCGCCTTCCACGGCGACCTGATCGAGATGTTCAAGAACAACCCGCTGATCCGCTCCAACGCCCTGGAAGTGTGCGGCACCGCCA TCGACCTGAAGCAGGTCGACTGCGACATCTACAGTGTCGCCGGCACCGCCGACCACATCACTCCGTGGCAATCATGCTACCGCTCGGCGCACCTGTTCGG CGGCAAGATCGAGTTCGTGCTGTCGAACAGCGGGCACATCCAGAGCATCCTCAACCCACCGGGTAACCCCAAGGCGCGCTTCATGACCGGCGAAGACCGC CCGGACGATCCGGTGGCCTGGCAGGAAAACGCGGTCAAGCACGCCGACTCCTGGTGGCTGCACTGGCAGACCTGGCTGGGCGAACGCGCGGGCGAACTGA AGAAAGCACCGACGCGCCTGGGCAACCGCACCTACGCGGCCGGCGAGGCATCGCCGGGCACCTACGTCCACGAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGAAACCGCGGTGGTGCGCCCCGCGGCGCATCACCGCGCTACGTCCACCACAGAGTCACGCGTATGCCGCCACCCTACATCTTCAGGACCGTCGAACTG GATGATCAATCCATCCGCACCGCGGTCCGTCCGGGCAAGCCGCACCTGACACCCTTGCTGATCTTCAACGGCATCGGTGCCAACCTCGAACTGGTGTTCC CGTTCATCGAGGCCCTGGACCCGGACCTGGAGGTGATCGCCTTCGACGTGCCCGGTGTCGGCGGCTCGTCCACGCCGCGCCACCCCTACCGCTTCCCGGG GTTGGCCAAGCTGACGGCGCGCATGCTCGACTACCTGGACTACGGCCAGGTCAACGCGATCGGCGTGTCCTGGGGCGGCGCCCTGGCCCAGCAGTTCGCC CACGACTATCCGGAGCGCTGTAAGAAGCTGGTGCTCGCCGCCACCGCCGCCGGCGCGGTGATGGTGCCGGGCAAGCCCAAGGTGCTGTGGATGATGGCCA
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| Amino Acid Sequence |
>poly(3-hydroxyalkanoate) polymerase 1
MSNKNNDELQRQASENTLGLNPVIGIRRKDLLTSARTVLRQALRQPLHSAKHVAHFGLELKNVLLGKSSLQPESDDRRFSDPAWSNNPLYRRYLQTYLAW RKELHDWIGESDLSPQDISRGQFVINLMTEAMAPTNTLSNPAAVKRFFETGGKSLLDGLSHLAKDLVNNGGMPSQVNMEAFEVGKNLATSEGAVVYRNDV LELIQYSPITEQVHARPLLVVPPQINKFYVFDLSPEKSLARFCLRSQQQTFIVSWRNPTKAQREWGLSTYIDALKEAVDAVLAITGSKDLNMLGACSGGI TCTALVGHYAALGEKKVNALTLLVSVLDTTVDTQVALFVDEQTLEAAKRHSYQAGVLEGSDMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNND TTRLPAAFHGDLIEMFKNNPLIRSNALEVCGTAIDLKQVDCDIYSVAGTADHITPWQSCYRSAHLFGGKIEFVLSNSGHIQSILNPPGNPKARFMTGEDR PDDPVAWQENAVKHADSWWLHWQTWLGERAGELKKAPTRLGNRTYAAGEASPGTYVHER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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