Pseudomonas entomophila L48, PSEEN5054 (pilH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCGAAGCGGCCCCAGGATTTCGGCCCCAGCAACGATGGTAGAGCAACTATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCCCGCACGATCC GCCGCACCGCGCAGATGTTGCTTGGCGAGGCGGGCTGCGAGGTGATCACCGCCAGCGATGGTTTCGACGCCCTGGCGAAGATCATCGATCACAAGCCGCG GATCATCTTCGTCGACGTGCTCATGCCGCGCCTGGATGGCTACCAGACCTGCGCGGTAATCAAGCACAACAGCGAATTCAAGGACACCCCGGTGATTCTG CTCTCATCCCGCGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGTTCCGACCAGTTCCTTACCAAACCGTTCAGCAAGGAAGAACTGCTCGACG CGATCCGCGCCCATGTGCCCGGTTTCGCCGTGCAAGACCAACCCGCACCCTGACGCCGCCAACACCGGCGGGGGGTTCACTTTCCTCATGGGGAAACAGC
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| DNA Sequence for Gene |
>PSEEN5054
|pilH
ATGGCCCGAGTTTTGATTGTCGACGATTCGCCGACAGAGTTGTACAAGCTGACCGCGATACTGGAAAAAAACGGCCATCAAGTTCTCAAGGCCGAAAATG GTGCCAATGGCGTGGCCCTGGCGCGTCAGGAGAAACCGGACGTCGTCCTGATGGACATCGTCATGCCGATCCTCAACGGCTTCCAGGCGACCCGCCAGTT GGCCAAGGATCCGGCGACCAAGGCCATCCCAGTGCTGGTCATCACCGCGAAGGACCAGGAAACCGACCGTATCTGGGCCCAGCGCCAGGGCGCCCGTGAC TTTCTGACCAAGCCGGTGGAAGAAGACGCGCTTATCGCCAAATTGAAAGAAGTGCTCGGCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCACCCGGCCTCAGGGCGCGTCGCTGACCGCCTTCGAGCTGTTGCTGGACATCGACCGCCGTTGCCGCCTGCTGGTCGCCGACCAGCCGCCTCAGGACAC GCGTCTGCAGCAGTGGAGCGGCATCGGCTTTCGCATTGCCGGGCAGTGGTTCGTCGCCCCCATGGGCGAGGTCGCCGAGGTGCTGCGCGAACCCCGCAGC AGCCGGGTTCCGGGGGTCCAGCCCTGGGTGCGCGGGGTGGCCAACCTGCGTGGGCGTCTGCTGCCGCTGATGGACCTGTGCGCCTTTTTCGGCCTGGGCC CGGCCGCCGCTGCCGGCAAGCAGCGGCGCGTACTGGTGCTGGACCACGAGGAGCTGTTCGCCGGCCTGCTGGTGGACGAGGTGGTGGGCCTGCAGCACTT TGCCCTCAGCAGCCTGGAACTGTCACCGCCGCAGCCGCTGATCCGCGCGGCCGCGCCTTTCGTGCAGGGGTATTTCCCCCGTGAACGCAACTGGGCAATC
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| Amino Acid Sequence |
>type IV pili response regulator PilH
MARVLIVDDSPTELYKLTAILEKNGHQVLKAENGANGVALARQEKPDVVLMDIVMPILNGFQATRQLAKDPATKAIPVLVITAKDQETDRIWAQRQGARD FLTKPVEEDALIAKLKEVLGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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