Pseudomonas aeruginosa AZPAE14359, NQ50_RS20270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14359 AZPAE14359_contig_21, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCCATCCGGAATGCGAGTGGGCGGACATAGGGTTCTCCTCGTCGTGGGAAACCCATGCTGGCCTGTCTTCGAGTATCCCGATATCGACCGGATGGTTG ATAGGTCGATATGCCACGGAAATAGCACGGAGCGGCGAAGGGAAAGTTATCGAAGATGAAGTATTAGATGGGTTTTCGTTTCTTCTTTTTTGGTTTTTTA GTTAATGGGTTCCTGTTCTTCTATAAGTATTTTCTGAATGTATTCTTATGTACCTATTGGCTGTTATCGGAAATGGACTACATATGTTTTCGTATGATTA TTATTTTTAAATCCTGTCTTTCTTTCTAGTATTTGGGTCTGCGTTTATCAGGGCGCAATCTTCGGCTGTCGCGTAATGGTCGGAGGCGCTCTAGGCGGCC GTCCCGGTTGCGCGCAAAGGCTTGGCTACCTTGGCCGGTTCGTACTGCATCGGCTCTCCAGGGAGCAGCCAGGATGTTCCACAACTCCAAAGGAAATCAG
DNA Sequence for Gene
>NQ50_RS20270
ATGAACAAGTTCAAACGTGCAATTCTTGCGCCCCTCGTTGCGTCGGGCACCCTTCTCGCGCTGATGTCCCCCGCGGCCCATGCGGTCGATGGGATCGTCA ACTTCTCGGGCAACATCACCGACGTCGCGTGCGATATCAACGGCCAGGCGCCGGGTGCGGGCAACGTCACCAACGTCGACCTGGGTATCGTGGCGCCGAC CCATTTCACCGCCGTCGGAACCAACTCCACTTTCCAGGAGTTCGACCTGGTCCTCTCCGGTGCCGGCTGCACCAATGACAAGAAGGTTTCCATCGCCTTC GATACGGTCACCAACGTCGACCGCATCAGCGGCAACCTGATGCTGATGGGGCCGTCGAAAGCCAAGGGCGTGCAGATCCAGATCTTCAACAATTCGGCGG CCAACACCACGAAGATCCCGCTGGGCTTGGTCGAGGCCGCCCCGCAGAAGGCAACCATCGACAAGAACACGGCCACCCTGAAGTACAAGGCCTCCTATGT GTCCACCGAGAAGACCGTGATCGCGGGTACCGGCCTGTCCCATATCCGCTACCTCCTGGCGTACGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCGGTCGACGGACGAAGAGGTGAGGCCATGGCGCCGCTAATGCATCGTTTTCATTCTTTCGTGGCGGCAAGCGCCGTGGCCATCGCCCTGTGCGCCG GAACGGCTCATGCCGGGCTGATCGCACAGGGCACTCGTGTCGTCTTTCCGGCCAGCGAGCGCGAGGTCACCTTGCGGGTCAGCAATACGTCCGGCACTCC CGTGCTGGCGCAAGCCTGGATCGACGATGGCCGGCAGGACGTTCCCCCCGAGGAACTGCAGGTCCCCTTCAGCGTCACGCCGGCCGTGACGCGAGTGGAC CCCAATGGCGGCGCCGTATTGCGCATCGCCTACCTGAAGGCCCCGTTGCCGACGGATCGCGAATCGCTGTTCTGGCTGAATATCCTGGAAGTTCCGCCCA GGGACGAAGACGAAAACAATGCATTGCAGTTTTCCTTTCGTTCGCGCTTCAAACTCTTCTTTCGACCCAGCCAGTTGAAGAGTGTCGATTCGGCTGCCGG
Amino Acid Sequence
>fimbrial protein
MNKFKRAILAPLVASGTLLALMSPAAHAVDGIVNFSGNITDVACDINGQAPGAGNVTNVDLGIVAPTHFTAVGTNSTFQEFDLVLSGAGCTNDKKVSIAF DTVTNVDRISGNLMLMGPSKAKGVQIQIFNNSAANTTKIPLGLVEAAPQKATIDKNTATLKYKASYVSTEKTVIAGTGLSHIRYLLAYE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site