Strain | Pseudomonas aeruginosa strain AZPAE14359 AZPAE14359_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGTGTCGCCAGCGGCCAGCTCGAGGCTTTGCTCGATGAGCAGCAGCGAGCGCTGGCGGCGGTACGGGCGAGCGCCGAGAGGCGCGCGAAGGACGCCGAG CAGGCACTCGGCGAGGCCAGGGCGCAGGCCGCGGAGCAGTATGCCGCGGCCGTGCGTCTGCTCCAGGAACCCGACATTGGCGCGGACTGCCAGGCGGCAG GTGCGGCGATCGACCGGGAGCTGGGACTATGACTCGTCTCCTGCTGGGGCTTTGTCTGCTTTTCGCGGGCTGCGCAGCCTCGCCGACGACACCTCGCCCC GTGCGCGTCGAGGTTCCCCTGGCAGTGCCTTGCCGTGTACCTGACGTGCGCCCGCCGAGCTGGGCCAGCGCCACGTTGCAGGCTGGCGATTCGCTGCAGG CCAAGGTTCGCGCATTGCTCGCCGAGCGCCGCCAGCGGCAGGGCTACGAACTCGAATTGCAGGCGGCGTTGCGTGCCTGCCGCTGAGACACTGGGCGCAT
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DNA Sequence for Gene |
>NQ50_RS00190
ATGGACGTCGATGGACGTGTGTCCGGCGCATATTGCCGTGTATTGATTCCGCAGCGTTGTCGAGCCAGGAATCGGCCGGTACAACGTAGTCATGCTTGTA CAGGTGTGTCCCCCCAGGGATGCCACCTGCAACCTCAGAGCCCGGCCCGTGTGCCGGGCTTTTTCGTTTGCATCCGACAACGGCTCGGGACGTGGAGGCT CCTCGCCGACCGCGTACCGCGCCACGGCCGACCGTCCTGGGGACGGGGCCAGACGACCCGCCTGGTGCGGGTCTTTTCATGTGCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGAGAGTTTTCCATGTCCATCCTGACTCAAGGTACCCAGATCTACGCCCTGGTTCCGCCGGTATCCGGTACCGGTGCCGCTACCGTCCTGGAGATCGAA GGCGTGACCTCGTTCAACCCGGGCGGCAATCCGGCCGACCAGATCGAAGACCCGTGCCTGAGCGACACTTCGCGCAAGTACAAGAAAGGCCTGCGCACCC CTGGCCAGGCGACCCTCGGCATCAACGCCGATCCACGCCTGGCCAGTCACGTTCGGTTGTTCCAGCTGTCCGAGAAAGATGGCGAGACGAGCGTCAAGTG GGCCATCGGCTGGTCCGACGGAATCGACGTAAAGCCGACCGTCAGCACCGAAGGCGACGATTTCGTGTTGCCGCCGGCGCGCACCTGGTTCACCTTCGAA GGCTACGTCAGCGACTTCCCCTTCGATTTCGCCAGCAACACGCTGGTCGCTACCCAGGCCACCATCCAGCGTTCCGGCGCCGGCAAGTGGACGCCGAAGT
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Amino Acid Sequence |
>hypothetical protein
MDVDGRVSGAYCRVLIPQRCRARNRPVQRSHACTGVSPQGCHLQPQSPARVPGFFVCIRQRLGTWRLLADRVPRHGRPSWGRGQTTRLVRVFSCA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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