Pseudomonas entomophila L48, PSEEN4326
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTCACCGTCAGCGACCGAGGAGACCGCGTGCAGGTGGCGGTCGCCAGAGGGCGGGTGCAGGTGCGTGGGCTGGAGGGCGGCGAGCAGGTTCTTCAGGC TGGTGAGCGCATCTGCCTGGATGGCCAGGGCCAATTGGGCACATTGCGCGCGGGTGGCGCGTTCGGTCCCGACCTGGCGCATTGGCAGCGTGGTTGGTGG TCGTTCACCGACCAGCCCTTGAGCGAAGTGATCGGCGAGCTCAATGCCTACGTGACGCGGCCGGTGGCCCTCGACCCTGGCGCCAGCGCCCTGCGCCTGA CCGGCAGCTTCCCCAGCGACCAGCCCGAGGTGTTGCTCGAAGCACTGCCACGTGTTCTGCCAGTACGGTTGGTGGAGCAGGGCGGGCATCGCCTGATCGT GCAGCGTTGATCCCGGTTTTCATGTGCCGAAATTTCTTTGAGGGGTAATTCGCGGCTGTCGCGTCATCAGCTGTGAACCCACCTTCTGCAAGGACCGATC
|
|
| DNA Sequence for Gene |
>PSEEN4326
ATGTCGCTTTCCTCCACCCGCTTCCCCGGCACCCTGCGCCGCCTGGCCCTGGCTTGCGCCGGCCTGCTGGCGGCCCAAGTGGCCCAGGCCGACAGCCCGC CGCTGACCCTGGACCTGCCGAGCCAGTCGCTGGAAGCCACGGTGCATGCCCTGGCCCATGAGTCGGGCGTGGCCATCGCCGCCGACAGCCGCCTGCTGTC CGGGCGCGGCGCCCCGGCGCTGCAAGGGCGCTACACGGTGCTGCAGGCCCTGCGCCAGGTGCTGGCAGGCAGCGACCTGGTGGCAGTGGAGGAGAACGGC GTGATCATCCTGCGTGGCGGCGGCGAGGACGGCGCACTGACGTTGGGCGCCACCACAGTCAATGCCAGTGGGTTCAACAGCGACCTGCCGGACACCTACA GCGGTGGCCAGGTCGCCCGTGGCGCCCGCATCGGCCTGCTGGGTAACCGCGACATCATGGACACCCCGTTCAGCGTCAGCGCCTACACCGCCAAGACCAT CGAGAACCAGCAGAGCGGCACGGTCGGCGCGGTGCTGCGCAATGACCCGTCGATCCGCTTCAGTACCGGCGAAGGGCATACCTACGAGAACTTCATGATT CGTGGCTACGCCCTGGACTCCACGGAGCTGGCGATGAATGGCCTGTACGGCCTGGCCCCGGATGGCCATGTGCCGACCGAGTTCCTCGAACGGGTCGAAG TGCTCAAGGGGCCGGGCGCGTTGCTCAGCGGCATGGCGCCCAACGGCGGCGTGGGCGGGGTGGTCAACCTGGTGCCCAAGCGCGCCGGTGACACCCCGCT TACCCGCCTGACCACCAGCTATGTGTCCGATGGCTATGTGGCCGAACACATCGATGTCAGCCGCCGTTTCGCCGACAACCGCTTCGGTATCCGCTTCAAT GGCGTGTACGGCAGCGGCGATACCGGCGTCGATGAGCAGTCCAAGGACCGCACCCTGGCATCGCTGGCCCTGGACTACCGAGGCGACGATTTCAAACTCG CGCTGGATGCCTACGAAAGCCACGAGAAGATGGACAACGGCAGCCCGATGATGGTCGGCTTCAGCAAGCTGGGTTCTGTGACCAAGGCGCCCAAGCCCGA CACCAACATCCTCGAAGGCATCAATGCCAAGCAGGTCAGCAAGGCGGTGACGCTGCATGGCGAGTATCAGTTCGACGACAGCTGGACGGCCTACGCCAGC GTGGGCGGTGCACGCACCCGCTATGACGGTTTCCTCAATGGCACCCGGGTGATCGTCACCAAACCGGACGGCACCGCCACGGGCGAGACCTACAACCAGG CGGGCTACACTCACAGCCTGTCCACCGAAGCCGGCCTGCGCGGCAACTTCATGACCGGGCCGGTCAGCCACCAACTGGTGCTCAGCACCACGCTGCTGCA CCAGGATATCGGCCGGGCACCGACCGTCACCGGCAAGGGCTACACCACCAATATCTACCACCCCGGCAAGGCAATCATCGCCGGCGACCACGGCAGCAAC GTCAAGACCGGCGACAACACGCTTTCCAGCTTCGCCGTGGCCGACACCCTGGGCTTCGTCGATGACCGCGTGCTGCTCACCCTCGGCGCCCGCGCCCAGC GCGTACGACAGAAGATGAGCACCCCGTCCTACGACGAGCGCAAGGTGACACCTGCAGTGGGCATCGTGCTCAAGCCGTGGGATGCGCCGGTGTCGCTGTA CGCCAACTACATCGAAGGCCTGACCCAGGGCGGCATGGTTACCGATGTGAAGGCCGCCAACTACAACGAGCAGTTCGCCCCCTATGTCGCCAAGCAGATG GAGGCGGGCGTGAAGTGGGACCTGGGCGACTTCACCCACACCCTGGCGCTGTTCCAGATCGAAAAGCCGAGCATGATCTACGACAAGGCCAGCAACCGTT ACAACGACGACGGCGAGCAGCGCAACCGCGGCGTGGAATGGACGATGTTCGGCGAAGTCACGCCCGATGTGCGCCTGCTGGGTGGCGTGACCTACACCCG CGCCGTGCTGACCAAGACCGCCAACGGTGCAATGGATGGCAACACCGCGCGTGGCGTGCCGGCCTGGTCGGCCAACCTGGGTGCCGAGTGGGACCTGCCC TGGGTCGATGGCCTGACCTTGACCGCGCTGGGTATCCACAGCAGCTCGCAGTACCTCGACAGCGCCAACCAGCTGAAGATTCCCCAGTGGACGCGTTACG ATCTCGGCGCGCGCTACGCCACCAAGGTGCTGAGCAAGGACGTGACCCTGCGCGCCAGCCTTGAGAACGTCGAGAACCGCGCCTATTGGGCCGGCGTGTT CAACGATGGTTACGCCACCGTCAGCGAACCGCGCACCCTCAAACTCTCCGCCAGTGTCGACTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTGGGCATGCAGCGATTGACCCGTGCCCTGGTATTGCTGGCCGCCTGTTGCGGGGCGGCAATGGCCGCCGATGAACCCCGCCTGGAGCCTGGCAAGGCC GTGAGCGGGCAGGCCAGTGCGACAAGCTCTCCGGCCTGGCAGTTGTCACTGGAGGCCGGCGACCTGGTGCGGGGCCGCCTCGATGGCGATGTCAGCCTGC GCTTGCTCGACGCCCAGGGGAAGCCATTGCGCCTGTTGATCGATGGCCTGGACCAGCCGCGTGAGTTTCTCTTCGTGGCCGGGCAGGCTGGTCGCTACCT GATGCGCACCGAGGCGCTGGCGATCCGCCCCAACGAACGTTTCAACTTGCGCCTGGATCAGGTGCTGCCGGTCGCCGAGCAACGGAAAAGACCTGTAACG TTGGCCAGCCCGACACTGCGCATGCTGTCAGGGGCATTGGCCAAGGGCGAGTCCACCGATGCGTTCTGGACGGCCCGAGGCGTTGACGGCACGCCCATGG
|
|
| Amino Acid Sequence |
>TonB-dependent ferric siderophore receptor
MSLSSTRFPGTLRRLALACAGLLAAQVAQADSPPLTLDLPSQSLEATVHALAHESGVAIAADSRLLSGRGAPALQGRYTVLQALRQVLAGSDLVAVEENG VIILRGGGEDGALTLGATTVNASGFNSDLPDTYSGGQVARGARIGLLGNRDIMDTPFSVSAYTAKTIENQQSGTVGAVLRNDPSIRFSTGEGHTYENFMI RGYALDSTELAMNGLYGLAPDGHVPTEFLERVEVLKGPGALLSGMAPNGGVGGVVNLVPKRAGDTPLTRLTTSYVSDGYVAEHIDVSRRFADNRFGIRFN GVYGSGDTGVDEQSKDRTLASLALDYRGDDFKLALDAYESHEKMDNGSPMMVGFSKLGSVTKAPKPDTNILEGINAKQVSKAVTLHGEYQFDDSWTAYAS VGGARTRYDGFLNGTRVIVTKPDGTATGETYNQAGYTHSLSTEAGLRGNFMTGPVSHQLVLSTTLLHQDIGRAPTVTGKGYTTNIYHPGKAIIAGDHGSN VKTGDNTLSSFAVADTLGFVDDRVLLTLGARAQRVRQKMSTPSYDERKVTPAVGIVLKPWDAPVSLYANYIEGLTQGGMVTDVKAANYNEQFAPYVAKQM EAGVKWDLGDFTHTLALFQIEKPSMIYDKASNRYNDDGEQRNRGVEWTMFGEVTPDVRLLGGVTYTRAVLTKTANGAMDGNTARGVPAWSANLGAEWDLP WVDGLTLTALGIHSSSQYLDSANQLKIPQWTRYDLGARYATKVLSKDVTLRASLENVENRAYWAGVFNDGYATVSEPRTLKLSASVDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|