Pseudomonas entomophila L48, PSEEN4110
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATCCGGCTCCCGCAACCAGATTCAGAAAAAAGGCCACTGTTTCGACAGTGGACTTTTTTATTGCGAGTCGGAAGACTTACGAAAAATCTTGTCGAATCAA TAATTAAGGTTTGACATCCCATCGAAAGCCCGTAGAATTCGCACCTCTGACGCGGGATGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCG TCGGTTCAAATCCGGCTCCCGCAACCATATTCGTCAGAACAAGCCCCGCCTATCGAAAGATAGCGCGGGGCTTGTTGCATCTGCCCCATCCTCTTCTCCT CGCGCTGCGCAAGCGCTATCTTCGCCAGCCCCAGCTCGCATGGCGTTGCGCCACCTTCCGCGCAGCTGAATGAACTATCTTTAACTATCCTGAAACAGAT TAACGACCCGGCCCGGAGTAATATCTGGACACGTTTTCCAAAGGGACTTTCACTTGGCCGTACCTTGCCCGTACCTCGCGCTGACCGCTCGGGGTAATCC
|
|
| DNA Sequence for Gene |
>PSEEN4110
ATGACCGCCCCCACTCCCGATACCCAGGCACCGCTGACCGCAGCCTTGCCCACAGCCGCCCATCGCCTGCCCTGGCTGGAACGCCTGAGCAAGTATCGCC AGCCCCTGGGGCTGGCGGTGACCCTGCTGTTGTTCGCCATGGGCCTGATCGCTTGCCGTCACCTGCTGAGCGAGCTGGACATCTATGCGCTGCACGACGC CATGCTCAGCGTACCGACCCATTCGCTGCTCGGGGCACTGCTGGCCACACTGGTCGGTTTTGTGATCCTGCTGGGTTATGAATGGTCCGCCAGCCGTTAT GCCGCCGTGCAACTGCCGGCCCGCACGCTGGTGCTGGGCGGCTTCAGCGCCTTCGCCATCGGCAATGCCATTGGCCTGTCGATGCTCTCGGGCGGCTCGG TGCGCTACCGCTTGTATGCCCGCCAAGGGTTGGGCGCCGCCGAAGTCGCCCGCATGACCGTGTTTGCCAGCCTGTCGCTGGGTTGCGCCTTGCCTCCCCT CGCGGCGTTGGCCACCTTGAGCGACCTGTCGGCGGCGGCTACCGCATTGCGCCTGCCCGCCCCCTTGCTCGCTGGCATCGCCGTGGCCGTCCTGGTTGCA ACCGCAGCCCTGGTCATCGGGCTGTATCGCCGTCGGCTGCCCGAGCAGCCTTTGGCGCACAGCCTGCTGGTGCAGTTCGGTCGCCGCACGCTGCGCCTGC CCAATGGCCGCCTGGCCGCCCTGCAACTGCTGATCACCGCACTGGATGTCGCCGCCGCGGCCACCGTGCTGTACATGCTGCTGCCGGAAGCACCGCCCTT CGGCGCTTTCGTGCTGGTCTACCTGCTCGCGCTCGCAGCCGGTGTGCTCAGTCACGTGCCGGGTGGCGTCGGGGTGTTCGAGGCAATCCTGCTGGCCGCC TTCGCCAACCAATTGGGGGCGGCGCCGCTCGCCGCGGCATTGCTGCTGTATCGACTGATCTATGTGGTGCTGCCGCTGCTGGCTGCCTGCGTGCTGTTGC TGGCCAACGAGGCGCGCCGCCTGCTGTTCGCCCAGCAAGCCATCCGCGCCGCCTCCGGGTTGGCGGCCCCGGTGCTGGCGATCCTGGTGTTCCTCTCCGG CGTGGTGCTGCTGTTCTCAGGCGCCACTCCCGAGATCGACAGCCGCCTGGAACACATGGGTTTCCTCATTCCACACCGCCTGATCGACGCCTCGCACTTC GGCGCCAGCCTGATCGGGGTACTCTGCCTGCTGCTGGCCCAAGGCCTGCGCCGGCGCCTGTCGGCGGCCTGGCTGCTGACCACCGTGTTGCTGCTGGTCG GCGCGGTGCTGTCGCTGCTCAAGGGTTTCGACTGGGAAGAAGCCTCGCTGATGTGCTTCACCGCCGCCCTGCTGGCCCTGTTCCGTCGCTCGTTCTACCG CCCCAGCCGCCTGCTGGAGCTGCCTTTCTCGCCGGTGTACCTGGTGGCCAGCGCCTGCGTGGTCGGGGCTTCGGTGTGGCTGCTGCTGTTCGCCTATCAG GACGTGCCCTACACCCACAAGCTGTGGTGGCAGTTCACCCTGGACGCCGATGCACCGCGCGGCCTGCGCGCCGCGCTGGGCAGCGCCGTGCTGCTGGTGA TCGTCTCGCTCACCTGGCTGCTGCGCACTGCCCGACCGGTGATCCACCTGCCCAACGACGAAGAGCTGCAGCGGGCCAACCGTGTGCTGCTGGCCTCCGA CCAACCCGACGGCGGCCTGGCCCTGACCGGCGACAAGGCGCTGCTGTTCCACCCCAGCGACAATGCCTTCCTCATGTACGCCCGCCGTGGCCGCAGCCTG GTGGCGCTGTACGACCCGATCGGCCCGGCCCAGGAACGCGCCGAGATGATCTGGCAGTTCCGCGACCTGTGCGACCTGCATCATGCCCGCCCGGTGTTCT ACCAGGTACGCGCGGAGAACCTGCCCTTCTACATGGACATCGGCCTGACCGCGATCAAGCTGGGCGAGGAGGCACGGGTCGACCTGCGCCGCTTCGACAT CGACGCCAAGGGCAAGGAGATGAAGGACCTGCGCTACACCTGGAACCGTGGTGGCCGCGACGGCCTGAGCCTGGAGATCCACGAACCCGGCCATGCACCG CTGGCGGAGCTCAAGGAAATCTCCGATGCCTGGCTCACCGGCAAGAATGTGCGTGAAAAGGGCTTCTCCCTCGGCCGCTTCAGCCCTGAGTACCTGCAGC ACTTCCGCATCGCGCTGATCCGCTTCCAGGGCCGCCCGGTGGCCTTCGCCAACTTGCTGGAAACCCACAGCAACGAGCTGGCCAGCCTGGACCTGATGCG CGCCCATCCTGAAGCGCCGAAGCTGACCATGGAATTCATGATGGTCGGCCTGATCCTTCACTACAAGAGCCATGACTATGGCCGATTCAGCCTGGGGATG GTCCCCCTCTCCGGCTTGCAGCCGCGCCGTGGCGCACCCTTGACCCAGCGCCTGGGCTCGATGGTGTTCCAGCGTGGCGAGCAGCTCTACAACTTCCAGG GCCTGCGGCGCTTCAAGGACAAGTTCCAGCCGGACTGGGAACCCCGTTACATGGCAGTGCCGGCCGGGCTGGACCCGCTGGTGGCACTGGCCGATACCGC CGCCCTGATCGCTGGTGGCCTGACTGGATTGGTGAAACGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGATCCGACGCTATTGGTTGTATGTACTGATTCCCCTGGTCCTGGCCGTCCTGGCCGGTGGCACGGCCTTCTGGCTGTGGACCCGCCCAGCGCCCGAGGT TCGCCTGGAACAGCTGACCTTGAAGGACGGCAGCAGCCTGACCCGTGCCACACCCGGTGTGCATGCCAAGGCCCGGGTCGCCATCGGCGTGCCCCAGGAG CAGGCCCTGAGCGACAAACAGCTGCTCGACCTGAGCCAGGCTGGTGAAGCCCAGCTGGTGCAGGTGATCCTGCCACCGGCCGACTGCGCCAAGCAGCAGG CCGCCATGGACGAGGCCATCGGCCAACTGGCCGACAAGCCCACTTTGGTCGCCGGTATCGGCCCAGGCGCCGCCCAGGCCTGGCGTTGGCTGGCTGCGCA GAACGACGACAAGGCCCGCGCCATCTCGGTGGACTTCACCGTCGAGCAGCCGGGTTGCCAGGCCGCCCTGCCCAAATCCGCCGCCCATGGCCACTGGAAC
|
|
| Amino Acid Sequence |
>hypothetical protein
MTAPTPDTQAPLTAALPTAAHRLPWLERLSKYRQPLGLAVTLLLFAMGLIACRHLLSELDIYALHDAMLSVPTHSLLGALLATLVGFVILLGYEWSASRY AAVQLPARTLVLGGFSAFAIGNAIGLSMLSGGSVRYRLYARQGLGAAEVARMTVFASLSLGCALPPLAALATLSDLSAAATALRLPAPLLAGIAVAVLVA TAALVIGLYRRRLPEQPLAHSLLVQFGRRTLRLPNGRLAALQLLITALDVAAAATVLYMLLPEAPPFGAFVLVYLLALAAGVLSHVPGGVGVFEAILLAA FANQLGAAPLAAALLLYRLIYVVLPLLAACVLLLANEARRLLFAQQAIRAASGLAAPVLAILVFLSGVVLLFSGATPEIDSRLEHMGFLIPHRLIDASHF GASLIGVLCLLLAQGLRRRLSAAWLLTTVLLLVGAVLSLLKGFDWEEASLMCFTAALLALFRRSFYRPSRLLELPFSPVYLVASACVVGASVWLLLFAYQ DVPYTHKLWWQFTLDADAPRGLRAALGSAVLLVIVSLTWLLRTARPVIHLPNDEELQRANRVLLASDQPDGGLALTGDKALLFHPSDNAFLMYARRGRSL VALYDPIGPAQERAEMIWQFRDLCDLHHARPVFYQVRAENLPFYMDIGLTAIKLGEEARVDLRRFDIDAKGKEMKDLRYTWNRGGRDGLSLEIHEPGHAP LAELKEISDAWLTGKNVREKGFSLGRFSPEYLQHFRIALIRFQGRPVAFANLLETHSNELASLDLMRAHPEAPKLTMEFMMVGLILHYKSHDYGRFSLGM VPLSGLQPRRGAPLTQRLGSMVFQRGEQLYNFQGLRRFKDKFQPDWEPRYMAVPAGLDPLVALADTAALIAGGLTGLVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|