Pseudomonas entomophila L48, PSEEN3947
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCTGCGCCAGTACATGCTGGCGCAACAGCGGCGCTGATCTCAGGTCCTGCTTTTCGCGGCCTTGAGTTCCTGGATGCGCTTGTCGATCAGCTGGCACT TGTCCGGCAGGTCCTTGCTGGCCGTATCGAGCTTCATACCCTGGAGCTCGTCATTGATCTCCTTGGCCTTCTGCGGATTCTGTTCGGTCAGTCGACTCAC CAGCCCGGCGAGCTCCTCCCTTTTCTGCGTGGCCTCTTCCGGGGTGCAGGCCCAGACGGGCAGGGCGCCTAGCAGGCAGGCTGCACAGGCAGTGGATAGC AGTGCTTTCATTCTTCCGATCTCCGGCAATGGGTATGTGCTGTGGAGGTGCGGGGCGGGGAGAGCGTTCGGCTTGGTCGACCGACGGCCCGAGTGGCGGG TGGTCCTGTAGTTTTCGGCGTCCAATAATTTGGCGATATTAATTTGACACTGCAGTGATGGCAAAATAACATCGCGCACCATTTTGCTCGATGCCCAGTC
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| DNA Sequence for Gene |
>PSEEN3947
ATGTCCGTAAGTCTCCATTTTTCTCACCGAACGGCCTACCTTGCCTTGTGGGCAATGCTGAGCGTGAATCCGGCTTGGGCGGCGTCTCCCGGCGACCAGG ACCTGATTCGCGACCGCCAGGACCGGCTACTGCAGGAGCAGCAACGGCGCCTCGACGAGCTGCGCACCTTGCCCGGCAATGCCGCCGAACCCAGCGAAGC GCAACCGGCGGCCGACACCCGCTGCTTCACCATCCGCACCATCGAACTCAAGGGCGCCGACAGCCTGTCCGCTGCGGAGCGCGACGCCTTGCTCAAGCCA TTCATTGGCCAGTGCCTGGGCGTCACCCAACTCAACGCCTTGCTCAAGGCCATCACCGACCACTACCTCGACCGCGGCCTGGTCACCAGCCGCGCCTACC TGCCGCAGCAGGACCTGTCCGCCGGCCATCTGCAGGTGCTGGTGGTGGAAGGGCGCCTGGAAGGGCTGCGTCCCGATGCCGGCAGTGGCCTGAGCGATCA TGAACTGGCCATGACGTTCCCCGGCGGCACCGGCGAGCGCTTGAACCTGCGCGAGATCGAGCAGATGGTCGACCAGCTCAACCGTCTGCCGTCGAACAAG GCGCAAATGGAGCTGACCCCGGGCAAGGCTGTCGGCGGCAGCGAGGTGCTGGTGCGCAATACCCCGCAGAAGCCGTGGCGCGCCTCGCTCTCGCGCAACA ACGAAGGCCAGCGCAGCACCGGCGAGCAGATGCTCAACCTCGGCCTGGAATGGGACAGCCCATTGGGCCTGGCCGACCAGCTGGTGCTGCGCGGTGGACA TGACGTGGTCAGCGACCACACTCTGGGCTCGAAGAATGGCGTGCTTTACTACAACCTGCCCTGGGGCTGGTGGAACTTCACCTACAGCTACAGCGAAAGC GAGTACCGCTCCCTGGCCCAGGCCAACCTCTTCGCCTTCAAACAGACCGGCGACAGCCAGAACCACCAGCTGCGCGCCGAGCGCGTGGTTCACCGCGACG CCACCAGCAAGACCTCGCTCAATGCCGGCATCGCCCACCTGCGCACCAACAACTACATCGAGGACAGCCGCCTGGCGGCCAGCAGCAATCGCCTGAGCGA AGCACAGTTCGGCATCAACCATGGCCGGCGCCTGGGCAATGCCTTCGTCAACCTCGACCTGGGCACGCAGGAAGGCATCGGCGCCTTCGACGCCCAGGAC AACGGTCACCCGCGCCCGGGCCAGCCGGTGGCGCGCTACCGCAAGTACAGCGCCACGCTCAGCTATGTGCAGGGTTTCGAGGTGCTGGGCGAGCGCCTGA GTTTCAGCAGCCTGGCCACCGGCCAGCGCAGCGAGGACGTGCTGTTCAGCCCGCAACGCATCAGCCTCGGCGGGCTGTCGTCGGTGCGCGGGCTGAAGGA CCAGTCGTTGTCCGGGGACAGCGGCGGCTACTGGCGCAGCGACCTGCGCTGGACCCGCCCGGTGAACTGGCCGGTGTTGCAGCCGATGCTGGCCGAGTAC GGCCTGGGCCTGGGCTACGACCTGGGCGTGATCAGCAACGACCGCTACAACGGCGAGTACCACGGCCGCGCCAGCAGCCATTCGCTGGAGCTCTTCGCCC GTGGCCAGCACCTGGCCGCCAGCGTGACCTTCGCCCACAGCCTGGAACGCCCCGATGCGCTGCCTGAAAAGGAACGCCCGGTGTATTTCCGCCTCGACCT CTTCATTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCCTGACCCACGAGACCTGACATGGACGTTCGCCTGTTCGCCTTCCTGGCCCGCCAACGCTCGGCTGAAATTCAGCCCCGCGCGCATTTCTGCGGGCT GCCCAAGCGCGGCCTGGCGTTCCTGCTGGCCAACGTCATGTTCTGGCAGCCGTTGTGGGCGCAGGCCGCCGAGGGCATCGCGGTCAGCGGGGCGGGCACC AGCCTGGGGCTGGCGGGCAACGGCGTGCCGATCGTCAACATCGCCACGCCCAACGGCAGCGGGCTGTCGCACAACCAGTTCAGCGACTACAACGTCGGCC AGCAGGGGCTGATCCTCAACAACGCCACCGCGCGCACGCAAGCCACGCAACTGGGTGGCATCATCCTTGGCAACCCGAACCTGCAGGGCCAGGCGGCCAG CACCATCATCAACGAAGTCAATGGCGCCAATGCCAGCCAGCTGCGCGGCTACACCGAAGTGGCCGGGCAATCGGCCAAGGTCATCGTCGCCAACGCCCAC
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| Amino Acid Sequence |
>secretion protein, TPS system
MSVSLHFSHRTAYLALWAMLSVNPAWAASPGDQDLIRDRQDRLLQEQQRRLDELRTLPGNAAEPSEAQPAADTRCFTIRTIELKGADSLSAAERDALLKP FIGQCLGVTQLNALLKAITDHYLDRGLVTSRAYLPQQDLSAGHLQVLVVEGRLEGLRPDAGSGLSDHELAMTFPGGTGERLNLREIEQMVDQLNRLPSNK AQMELTPGKAVGGSEVLVRNTPQKPWRASLSRNNEGQRSTGEQMLNLGLEWDSPLGLADQLVLRGGHDVVSDHTLGSKNGVLYYNLPWGWWNFTYSYSES EYRSLAQANLFAFKQTGDSQNHQLRAERVVHRDATSKTSLNAGIAHLRTNNYIEDSRLAASSNRLSEAQFGINHGRRLGNAFVNLDLGTQEGIGAFDAQD NGHPRPGQPVARYRKYSATLSYVQGFEVLGERLSFSSLATGQRSEDVLFSPQRISLGGLSSVRGLKDQSLSGDSGGYWRSDLRWTRPVNWPVLQPMLAEY GLGLGYDLGVISNDRYNGEYHGRASSHSLELFARGQHLAASVTFAHSLERPDALPEKERPVYFRLDLFI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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