Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGTTGCTCGAACAGGTTGGGATGCAGGCGGATGTCCACCATCAACCAGTCGGCCACGATGAACAGCGTCCAGATCAGGAACGCCACCCCGATGGCAGCG CGTCGCTGCATCAGCGAGTTCCAGCTGAGAAACTCGCGAAACTCGTTTTCCAGTTCCTTTTCGAACCGCAACCAACGAAAACCGTTGCGCAACTGGCGCG CATACGGATTATCCGGCAGACCAGCCTGTACCAGGCCGTCGCGTGCAAGCATGCTGACTCCCCTACCTCGGACCGAACGCTGGAACAGGCCTGGACGACA ATACCCTGGCGCCTCTACAGCGATGAGTCAAAAAGCCATCACCCGTTACCAGACAATAGGGCATGCGGCGTGCCGAGGCGATACCAACCATCGGCGCAGC GGGACGCCCCGGCGAGCGAATGGCAAGATCCGTGGGCCAATTGGCATTGCGGCCAGGTCCGAAGGACGCCAGACTGCCGCCATCGCCATGAGGTCATGCC
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DNA Sequence for Gene |
>NQ52_RS10890
ATGCCCGAACCGCGCTTGATTGCCTGCCTGATCTATCCCGACGTGATGAGCCTGGACGTGACCGGACCGCTGCAGGTGTTCGCCTCGGCCAACGTCGAAC GCCAGCGCCAGGGCCTGCCGCCTTTCTACCGGATACAGGTGCTCGGCGAGCGTAGCGAAGCGGTGCCCAGTTCCGCGGGCATCCGCATCTGCGCCGACCT CGCCTGGCGCGACTGTCCGCCGGAAAGCCTGGATACCCTGTTGGTGCCCGGCGGCCTCGGTGTCGAGGCGCAGACCCGCAACGCCGACCTGCTCGCCTGG CTGAAAGCCGCCGAACCGCGCATACGGCGGCTCGGCTCGGTGTGTTCGGGAGCGCTGATCCTGGCCGCCGCCGGGGTGCTCGACGGGCACCCGGCGACCA CCCACTGGGCCGACGTGGCGACGCTGCGCCAGGGGTTTCCCGGCGTCCATGTGCAAGGCGACCGCCTGCACACCTACGACCCGCGGTGCCGCGACGGCGA CGCCCACATCTTCACCTCGGCCGGCGTCACGGCGGGAATCGACCTGGCCCTGGCGCTGGTCGAGGCCGACCTCGGCCGCAGCCTGGCGCTCAGCGTCGCG CGACGCCTGGTGATGTTCCTCAAGCGTCCTGGCGGCCAGGCCCAGTTCAGCGCCTGGCTGACCCCGGAACCGAGCCGCACCCCGCGCCTGGCCGCGCTGC TGGAGTGGATTCCCGCCAACCTCGCCGGCGACCTGTCCCTGGAAGCCCTCGCCGACCGGGCCTGCATGAGCCCGCGTACGTTGTCCCGGGTATTTCTCCA GGAACTGGGCGTGGCGCCGGGTCGCTACGTCGAGCGGGTTCGCCTGGAGGCCGCGCGCGCCCTGCTGCAGGACGCCCAGGCATCGATCGCCACGGTGTCC CGGCTGTGCGGCTTCGGCCATCCGGAAAACCTCCGGCGGACGTTCCACAAGCATCTTTCGGTCAGCCCCCAGGAATACGCCGAACGCTTCGGCATGCTGG CCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCTCCCACCGAGGACCTTCCCATGCTGGAACTGCGCCCCAACTGCGAGTGCTGCGACCGCGACCTGCCCGGCGACAGCGGCGACGCGCTGATCTGCACC TTCGAGTGCACCTTCTGCCGCGATTGCGCGACGACCCGCCTGGGCGGCCAATGCCCGAACTGCGGCGGCGAACTGCTGGCCCGGCCAAGGCGTCCGCGGG ATGCGCTGGTCCGTCAGCCTGCCTCCAGCCGGCGCGTCGTCAAGCCCGGCGGTTGTCCGGAGTGACGCCATGCTGCTACGCAACCCGACCCTGCTCCTGC TGTTCTGCGGCCAGGCCCTGTACTGGTCCTGCTCGCTGATCGGCATAACACTGACCTCGCTGGTCGGCGTCCAGCTGGCGCCGTTGAACAGCCTGGCCAC TCTGCCCCTGGCCCTGCTGGTGCTGGGCAACCTGCTGGCGGTGCAGCCGTTGTCGCACTTCATGCAGCGCCACGGCCGACGTCCCGGGCTGATGCTCGGC
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Amino Acid Sequence |
>transcriptional regulator
MPEPRLIACLIYPDVMSLDVTGPLQVFASANVERQRQGLPPFYRIQVLGERSEAVPSSAGIRICADLAWRDCPPESLDTLLVPGGLGVEAQTRNADLLAW LKAAEPRIRRLGSVCSGALILAAAGVLDGHPATTHWADVATLRQGFPGVHVQGDRLHTYDPRCRDGDAHIFTSAGVTAGIDLALALVEADLGRSLALSVA RRLVMFLKRPGGQAQFSAWLTPEPSRTPRLAALLEWIPANLAGDLSLEALADRACMSPRTLSRVFLQELGVAPGRYVERVRLEAARALLQDAQASIATVS RLCGFGHPENLRRTFHKHLSVSPQEYAERFGMLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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