Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTACATCAGTCAGTCGGACAAAGGCGACCTGGTCATCGGCGCCGGCATCGACGGCTACAACGGCTACGGCCAGCGCGGCTCGTACCCGGTGATCGAGCA CACCCTGCAAGCCATCGTCGAGATGTTCCCGGTGCTCTCGCGGGTACGCATGAACCGCCAGTGGGGCGGCATCGTCGACACCACCCCGGACGCCTGCCCG ATCATCGGCAAGACTCCGGTGCAGAACCTGTTCTTCAACTGCGGCTGGGGCACCGGCGGCTTCAAGGCCACTCCCGGCTCCGGAAACGTCTTCGCCGCCA CCCTGGCCAAGGGCGAACCGCATCCGCTGGCCGCGCCCTTCTCCATCGAACGCTTCCACAGCGGTGCGCTGATCGACGAGCACGGCGCGGCGGCAGTGGC GCACTGACAAAAGCCGCCCGAAGGGCGAAATCCGCTGCCCCTCGCCCTTCAGGGAGAGGGTGCCGGTCAACCGGCAAGAACAGTTTCCGGAGGCTACAAA
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DNA Sequence for Gene |
>NQ52_RS08880
ATGCTGAATATCTTCTGCCCCCACTGCGGCGAACTGCGTTCCGAAGAGGAATTCCACGCCAAGGGTCAGGCCCACATCCCGCGCCCGCTCGACCCGAACG CCTGCAGCGACGAGGAATGGGGCGACTACATGTTCTTCCGCGACAACCCGCGCGGCCTCCATCACGAGCTGTGGGTGCACGCCGCCGGCTGCCGCAAGTA CTTCAACGTCACCCGCCATACGGTGACCTACGAAATCCTCGAGACCTACCTGATCGGCGAGCAGCCCAGCGTCGTCGCCGACGGTGAGAAGAAACCCGCC GTACAAGGGGAACCGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCAGATCAATCGCCTGTCCAGCGGCGGCCGCATCGACCGCAACCGCCCGCTGACCTTCAGCTTCAACGGCCAGCACTACCAGGGCTATGCCGGCGACAC CCTGGCCGCCGCGCTGCTGGCCAACGGCGTCGACATCGTCGGCCGCAGCTTCAAGTACTCGCGGGCGCGCGGCATCGTCGCCGCCGGCGCCGAGGAGCCC AACGCGATCCTGCAGATCGGCTCCCGCGAAGCCACCCAGATCCCCAACGTGCGCGCCACCCAGCAGGCGCTCTACGGCGGCCTGGTGGCCACCAGCACCA ACGGCTGGCCGAACGTGCAGAACGACCTGATGGGAATCTTCGGCAAGGTCGGCGGCAAGCTGATGCCGCCCGGTTTCTACTACAAGACCTTCATGTACCC GCAGTCGATGTGGATGACCTACGAGAAGTACATCCGCAAGGCCGCCGGCCTGGGCCGCGCGCCGACCGAGGTCGATCCGGACAGCTACGACTGGATGAAC
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Amino Acid Sequence |
>sarcosine oxidase subunit delta
MLNIFCPHCGELRSEEEFHAKGQAHIPRPLDPNACSDEEWGDYMFFRDNPRGLHHELWVHAAGCRKYFNVTRHTVTYEILETYLIGEQPSVVADGEKKPA VQGEPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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