Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_45, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
|
|
DNA Sequence for Gene |
>NQ52_RS29025
CGGCGGCGCCAATGTCACGCTCGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACCTCGTGGCCAGCGCCGCGAGCCTGAAC AACTACGGCACCCTGGGTGGCGGCGGCAGCCTGCGATTGAACGTGCCCGCCCTGCTCAACGAGCGCGGGTTGCTGTTCAGTGGCGCCGACATGACCCTGC GCGCCGGCGACATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCGGGGGGCTGGGCAAATCGCTTGGAGAA CATTTCCGGGAATTTAGAGAGCACAGGTGATATGCGTTTCTCCGTGAGTTCACTTCTCAATAGAAGGGAAACCCTAGAGATTGAAGGTGACTTGCAGAAT AGCGCTATTGGCGTCCGCTGTACGGGGTGTCAGCTTTCTGAGAGGTGGGGAAAAACTAGGTCTTCGAGCGAGCTTGTCTGGATCAGGGAATATAAGTCTA CATTGGGAGAGTCTTCTGCCGCTGCTTCAATTACGGCTGGTCGAGATCTGCTTGTTGTAGGTGCAAGCCTGCAGAATATTGCTTCTAATATAAGTGCTGT AAGAGACGCCACGCTATCTCTGAGTAATTTCGAAAACAAAGGTTATGCGTTAGGGGAATATGCGGTCAGGGGCGTTTATTCGCCGCCGAGTAAATTTGGC GAAGAATTGCTTATGCGCATATTGGCGTATAACGCTGTCAACGATCCCAGTTATGGGGAGGGATATGCGAGCACAGGGGGGAGACTTCCGAATATTCATT ATTTCGACAAGAATTTTAATGAAAAAGTCTCTCCGCTGGAGGTCATTCATGGAAACGGGAAAAATGGTGGGCCGGGTTGGCACCTGTACTTCGGTACCTT AGATGTTGAGTATCCGGGCACAGATCGCTGGAATAAGGCTATTGGACGAATACCGGCGCCGAATTATTCATCGAAAAAAACGGATGCTATTCCAGATCTA CTTAAGGGATTGGCTCCTCTCGATGAGTTGACGATTAACAAAGGGGCGAACTCAACGGTTGGTGCTGTCGTGCAAGCTGGCGGTCGTGTAACGGTGAATG CTGCGGAGAGTTTCAATAACTCTGTCCTACAGGGATTTCAGGCCGTTCAGGAAACCCAGTTACCTCATCAGGACATAGCTGTTTCAAGCACGACGAGCGC CGTAGTGACTCTGAAGAGTCAACTGCCAGCGGATTTGGCAAGGCAACAGATCAATCCTCTCACCTTGCCGGGCTTCAGCCTGCCTCAAGGCCAGAATGGG CTCTTCCGCCTGGCGTCCCAAGGAGCCCAGGTGAACCAGGCAAGTGGTGCTCTGAAATCCGCCAGCGATCTCACCCAGAGCGGCCATGGCGTATCTGTAT CCGCACAGGCAGGCAGTGACGCAAGTGGCTGGAGTACCCAGGCGCGTCGTGTCGGCGATGATCGGGTCACCTCGCTTACCGGTTCCGCCTATCAAGGCCG GGTAGCTGAGGCTATCGATGCGCTACGGGCTTCCGCGCCAATCTCGGGCGACGGGGGAAACACTGGCCGTTTCCAGGCCGGTGAGCACCAGGCGACCACG GGACTGGGTGGACTCGTCGAGGGCAATGCATCGGGTCACAGCGGCAATGGTGTCATCCTCGCCGATCTGCGCGGTGGTCTACCCTCGTTCTCAAGCCTTC CCGCGGCTGATCGTGTTCAAGGCACAGTGCCCGGTCACGATGGGAATGGAACTATTCTCGCCAATTGGCAGGGTGCGCAGGCGACGGTCCAGGCCTCGCC TTCGACAGTGCGTGTAGAGGGGGTAGTTTCCAGTCCAGGTGGCAATGGCAGCATCCTTGCCGATCTGCCGGCTGAACAGTCGTCGGTGCAGGCACTGCCT TCGGCCGTTAGGGCTCAGGGCAGCCTGCCTCACCTCGAAGAGCGGAGCGCCGTTCTTGCCGAGCCTCCGGTTGGGCAGCCGGCGCTGCAAACCCTGCCGT CGGTTGCGCGCGTTGAGGGCGTGCCCAGCAATGCCACACCGAGCAACAGCCACAAGTATCTGATCGAGACCAACCCGGCGCTCACCGAGCTGAAGCAGTT CCTCAACTCGGACTACCTGCTCGGTGGCCTGGGTATCAATCCGGATGACAGCAAGAAGCGCCTGGGCGACGGTCTATACGAGCAGCGCCTGGTACGCGAA GCGATCGTCCAGCGTACGGGGCAGCGCTTCATCGCCGGATTGAACAGCGACGAAGCGATGTTCCGCTATCTGATGGACAACGCCATCGCCAGCAAGGACG TATTGGGACTGACCCCTGGCGTCACCCTCAGCGCCGCCCAGGTGGCCGCGCTGACCCACGACATCGTTTGGCTGGAAGAAGTCGAGGTGAATGGCGAGAA GGTCCTCGCCCCCGTGGTCTACCTGGCCCAGGCCGAGGGGCGGTTGGGCCCGAACGGCGCGCTGATCCAGGGGCGCGACGTGAACCTGATCACCGGCGGG GACCTGAGGAACGCCGGTACCCTGCGCGCGCAGAACGACCTCAGCGCGACAGCCGGCAACATCGACAACAGCGGCCTGATCGAGGCCGGCAACCGCCTCG ACCTGCTGGCCAGCGGCTCCATCCGCAATGACCAGGGCGGCATCATTGCCGGGCGCGAGGTAAGCCTCTCCGCCCTTACCGGAGACGTCATCAATGAACG GACGGTGACCCAGCACCAGTCCTCCTACAGGGGAACCGGTACCACTGAGGCATTTGCCGATAGCGCCGCGCGTATCGAGGCTGCGCAGAAGCTGACCGTT TCGGCAGGACGCGATGTAGCCAATATTGGCGGTGTCATCGACAGCAAGGGCGACCTCGCCTTGCAAGGCGGCAGGGATGTCCTGGTTTCGGCTGCGGTAG CGGAGCAGGGCTGGACGGCAGGAAGCCAGGCATACCAGACCCAGACGACCCAGATGGGCGCCGAGGTCGTGGCGGGGCGCGATATCAGCGTCAGCGCCGG ACGCGATATCAGCGTCGTGGGCAGCCGCATCGACGCTCGTCGCGACGTGACATTCGAGGCGGGTCGCGATGTGGGCCTGGTCGCGGCTGCCAACGAAGAG CATGCCTATGGCAAGACCAAGAAGGTCACTTTCCAGGACGACAAGATCACCCAGCAGGCCACTCGCGTGGACGCTGGCGGCGATCTGGCGATCAATGCCG GACAGGACCTGCGGCTGGTCGCGAGCCAGGCCAGCGCCGGCGACGAAGCCTACCTGGTGGCCGGCGACAAGCTGGAGCTGCTGGCCGCCAACGACAGCAG TTACTACCTCTACGACAAGAAGAGCAAAGGCAGCTTCGGTAGCAAGAAGACCCGGCGCGACGAAATCACCGATGTGACGGCAGTGGGCAGCCAAATATCC AGCGGCGGCGACCTCACCCTGCTCAGTGGCGGCGACCAGACTTACCAGGGCGCGAAGCTGGAATCGGGCAACGACCTGGCCATCGTCAGCGGCGGCGCGG TGACCTTCGACGCGGTGAAGGACCTGCACCAGGAGAGCCACGAGAAGAGCAAGGGCGACCTGGCGTGGCAGTCGTCGAAGGGCAAGGGCCAGACCGACGA AACCGTACGCCAGACCCAGATCGTGGCCCAGGGGAATCTGGCGATCAAGGCCGTGGAAGGGCTGAAGATCGACCTCAAGCATATCGACCAGAAGACCGTG AGCCAGACCATCGATGTCATGGTCAAGGCCGATCCGAGCCTCGCCTGGTTGCGGGAGGCCGAAAAACAGGGCGACGTCGACTGGCGCAAAGTCCGGGAAG TACATGACAGCTTCAAGTACAGCCATTCGGGGTTGGGAGTCGGAGCGCAACTGGCCGTTGCCATCGTCGTGACTTATCTCACTGCCGGTGCTGCTAGTGC GGCGATTGGTAGTGCTGCTGGTGCCACCGCTGGATCAGGGACCGCGATGGCTGCTGGTACGGCCGCCACAGCTACGACTGCGGCCACCTCAGCAGGCTGG GCGAACATTGCCCTCACTGCCGCGGCGACATCCGCCGCCTCCCAAACCGCCATCAGCACCATCAACAACCGAGGTGATTTGGGAGCGGTTGCCAAAGACG TGACCTCCAGTGATGCCCTGAAAAACTACGCTGCCGCAGGGATCAGTGCGGGCTACTCTCCGCAAAACATTGGTTTGCAGCTGTCCGTCAATGCCGCACT GAAGACCGTCACCCGGGGTGGCAGTTTCAAGGACAACCTCGGACAAGCCGCTATCGACATGATTGCGGATGCTGTTTCCGGGGCTATCTACAACGAGGTG GGTGATGCCCTGACGGGTACCGGTATACCGACTAAGGTGGCGGTCCACGCCTTGGTCGGTGGTCTGATGGCCGAAGCGGCAGGTGGAGACTTCCGTACTG GAGCCTTGGCGGCGGGTGCCAACGAAGCGGTGGTAGCGGCTTTCGGGGAGAAAATTTTCCCTGGTGAGCAGCACGAAAAACTGTTGGGCATGACCTCGAA CCTGATTGGCATGACGGTCGCGGCAGCTGCTGGCGGAGACGAAAAGGCACAGGAGAAGGCTGGCTGGGTGGCGCAGCAGGCGACCCTTAACAACTATCTC TTCCATGAAGAAATGGAGGAGATGGCCAATAAGATCAAGGCGTGCGGAGGTGATCAGAACTGCGAGCAGCCGATCCGTGAACACTATGCCGACTTGGATG AACAACGAAAC
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AAGGCATTCCCAGAGCTCTGCCGGGCCAACCTAACGTCTTGTGTCCAGATCGCCAACCGCTTGAGCGCGGAAGAACAGCTCAATGTCGATCTGATGGAAA GTTTGCGGAACGCCCAGTACAACGGTATAGCCGGTGCTATCGGCATTGCGTTCATCCCCAGTAACCGTGTATCTGCCGATCAAGCTACCCTAGAGTATGT CCGTCAGACCGGAGGCACAGCAGAGGAATTCAAAGCGGTCCTGGCTATGCTGGGTGCTGGGGTGGCTGGAGTCGGTCCCAAAACGGTTGAAAAAGCTACC AATGCATTGGATCGTTTGAAGGCACTTCAAGCGGCGAAGGGAACAGTACCGGCAGAAGTACCGGCTACTTCTGTAATAGCTAAAGAAGGTTTATACAATG AATTACGTGCTGCTCAGGCGAGGGATGCTTTAATCGGAACTACTTTGCCAGGTGCGAAGGCTCCAGTTACGGTTACAGCGGAGGGAAGCGTTGGAGGAAA
|
|
Amino Acid Sequence |
>hypothetical protein
GGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGSLRLNVPALLNERGLLFSGADMTLRAGDITNLYGDVYSLGRLDIARDDAGGWANRLEN ISGNLESTGDMRFSVSSLLNRRETLEIEGDLQNSAIGVRCTGCQLSERWGKTRSSSELVWIREYKSTLGESSAAASITAGRDLLVVGASLQNIASNISAV RDATLSLSNFENKGYALGEYAVRGVYSPPSKFGEELLMRILAYNAVNDPSYGEGYASTGGRLPNIHYFDKNFNEKVSPLEVIHGNGKNGGPGWHLYFGTL DVEYPGTDRWNKAIGRIPAPNYSSKKTDAIPDLLKGLAPLDELTINKGANSTVGAVVQAGGRVTVNAAESFNNSVLQGFQAVQETQLPHQDIAVSSTTSA VVTLKSQLPADLARQQINPLTLPGFSLPQGQNGLFRLASQGAQVNQASGALKSASDLTQSGHGVSVSAQAGSDASGWSTQARRVGDDRVTSLTGSAYQGR VAEAIDALRASAPISGDGGNTGRFQAGEHQATTGLGGLVEGNASGHSGNGVILADLRGGLPSFSSLPAADRVQGTVPGHDGNGTILANWQGAQATVQASP STVRVEGVVSSPGGNGSILADLPAEQSSVQALPSAVRAQGSLPHLEERSAVLAEPPVGQPALQTLPSVARVEGVPSNATPSNSHKYLIETNPALTELKQF LNSDYLLGGLGINPDDSKKRLGDGLYEQRLVREAIVQRTGQRFIAGLNSDEAMFRYLMDNAIASKDVLGLTPGVTLSAAQVAALTHDIVWLEEVEVNGEK VLAPVVYLAQAEGRLGPNGALIQGRDVNLITGGDLRNAGTLRAQNDLSATAGNIDNSGLIEAGNRLDLLASGSIRNDQGGIIAGREVSLSALTGDVINER TVTQHQSSYRGTGTTEAFADSAARIEAAQKLTVSAGRDVANIGGVIDSKGDLALQGGRDVLVSAAVAEQGWTAGSQAYQTQTTQMGAEVVAGRDISVSAG RDISVVGSRIDARRDVTFEAGRDVGLVAAANEEHAYGKTKKVTFQDDKITQQATRVDAGGDLAINAGQDLRLVASQASAGDEAYLVAGDKLELLAANDSS YYLYDKKSKGSFGSKKTRRDEITDVTAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFDAVKDLHQESHEKSKGDLAWQSSKGKGQTDE TVRQTQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDVMVKADPSLAWLREAEKQGDVDWRKVREVHDSFKYSHSGLGVGAQLAVAIVVTYLTAGAASA AIGSAAGATAGSGTAMAAGTAATATTAATSAGWANIALTAAATSAASQTAISTINNRGDLGAVAKDVTSSDALKNYAAAGISAGYSPQNIGLQLSVNAAL KTVTRGGSFKDNLGQAAIDMIADAVSGAIYNEVGDALTGTGIPTKVAVHALVGGLMAEAAGGDFRTGALAAGANEAVVAAFGEKIFPGEQHEKLLGMTSN LIGMTVAAAAGGDEKAQEKAGWVAQQATLNNYLFHEEMEEMANKIKACGGDQNCEQPIREHYADLDEQRN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|