Pseudomonas aeruginosa AZPAE14373, NQ52_RS08365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGACCTGGAACTGGTGGCGGCGAACTTCGTTTCCGGCGAGACGCCGGCGCGCCGCCGCGACTGCGCGACGACGGATTGCCCGGCACCGCTGCACACCCTG TCGAAGACCGATACGGAGGAAAACCGGAGCGCGCTCAATTGAGACCGCGAAGGACGTGCAGGCAATTGTTCGCCTGGCGTGAAGTCGATGTCCCGGGCGG GTCGACAGAGGTCGAACAATACGCATGGAATTGTTTTTTCAATAAGGCGCTATTTATATGAAACGGTTTTTATAATATTCCAGTGTCTTCGGTAGTTTAT CTTTCCTGCATGATTTCATATATGCGGAATTCGTTCGTGCATATGCTTTAAGTGCAGCTTAATTTTTTTCATGAAACCTGTGGACATTGGAAAATGAGCT GTGTCAGTTTGGACTTCGGCCTGATCTGGCCGATAACTGCAATTATCCATCCGATAATTGTATCCGAGTTATTTCCTTTACAACTTAAAGGGATATGACA
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| DNA Sequence for Gene |
>NQ52_RS08365
ATGTCCAGCAATTCTCTTGCATTGAAAGGTCGTAGCGATGCGTATACCCAGGTAGACAACTTCCTGCATGCCTATGCGCGGGGCGGGGACGAATTGGTCA ATGGCCATCCGTCCTATACCGTCGACCAGGCGGCGGAGCAAATCCTCCGCGAACAGGCGTCGTGGCAGAAAGCGCCGGGCGACTCGGTGCTGACCCTGTC CTATTCGTTCCTGACCAAACCGAACGACTTCTTCAATACGCCGTGGAAGTATGTCAGCGATATCTACTCGCTGGGCAAGTTCAGCGCCTTCTCCGCGCAG CAGCAGGCCCAGGCCAAGTTGTCGCTGCAATCCTGGTCGGACGTCACCAATATCCACTTCGTCGACGCCGGCCAAGGCGATCAGGGCGACCTGACCTTCG GCAACTTCAGCAGTAGTGTCGGCGGTGCGGCGTTCGCCTTCCTGCCGGATGTACCGGATGCGCTCAAGGGGCAATCCTGGTACCTGATCAACAGCAGCTA CAGCGCCAACGTCAATCCGGCCAACGGCAACTACGGACGCCAGACCCTGACCCACGAGATCGGCCATACCCTGGGCCTGAGCCACCCTGGCGACTACAAC GCCGGCGAGGGCGATCCCACCTACGCCGACGCTACCTACGCCGAGGACACCCGCGCCTATTCGGTGATGAGCTACTGGGAAGAGCAGAACACCGGCCAGG ACTTCAAGGGCGCCTATTCCTCGGCACCGTTGCTGGACGACATCGCGGCGATCCAGAAGCTCTACGGGGCCAACCTGACCACCCGCACCGGCGACACGGT GTACGGCTTCAACTCCAACACCGAGCGCGACTTCTACAGCGCCAACTCGTCCAGTTCCAAGCTGGTGTTCTCGGTGTGGGACGCCGGCGGCAACGACACC CTGGACTTCTCCGGCTTCAGCCAGAACCAGAAGATCAACCTCAACGAGAAGGCGCTGTCCGATGTCGGCGGGTTGAAGGGCAATGTGTCGATCGCTGCCG GGGTCACCGTGGAAAACGCCATCGGCGGCTCGGGTAGCGACCTGTTGATCGGCAACGACGTGGCCAACGTGCTCAAGGGCGGCGCCGGCAACGACATCCT CTACGGCGGCCTCGGCGCGGACCAGTTGTGGGGCGGCGCGGGAGCCGACACCTTCGTCTACGGCGATATCGCCGAGTCCTCCGCGGCGGCGCCGGATACC CTGCGCGACTTCGTCAGCGGCCAGGACAAGATCGACCTGTCCGGGCTGGACGCCTTCGTCAACGGCGGGCTGGTGCTGCAATACGTCGACGCCTTCGCCG GCCAGGCCGGCCAGGCGATCCTGTCCTACGACGCGGCGAGCAAGGCCGGCAGCCTGGCGATCGACTTCAGCGGGGACGCCCATGCCGATTTCGCGATCAA TCTGATCGGCCAGGCGACCCAGGCCGACATCGTCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCGCTGAAGCGGGCGCGGTTCGGTGCGGCGGTACGAACCGCGGCCCTTCGGCCGGCCGGGCACTGTTCGAATTGATAGGTGTCTTCCACAGGAGCGAAG TTGTGAACTGTGGCGCGCCCGTGGGCCGGCGGCCCGGCGGACGAACGGAGGCCCGCGGCGCCTGGTGCGCGCTGGCGTTCGAAGCGAGGATGGCGGGCGG CGTTCGCCGCGTTCTCCGATGTTCCAGGCTTGAAGGAGATCTCTCGATGTCGGCAAGCGCGAAGCTCTCCAGGATGGTTTGCTTGCTCTGCGGTTTTTTC AGCACAGGTATCAGTATGGCCAGCAGTCTGATTCTTCTCAGCGCTTCCGATCTCGCCGGGCAATGGACCCTGCAGCAGGACGAGGCGCCCGCGATCTGCC ACCTGGAGCTGCGCGACAGCGAAGTGGCGGAAGCCAGTGGCTACGACCTGGGCGGCGATACCGCCTGCCTCACGCGCTGGCTGCCCAGCGAGCCGCGCGC
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| Amino Acid Sequence |
>serine 3-dehydrogenase
MSSNSLALKGRSDAYTQVDNFLHAYARGGDELVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGKFSAFSAQ QQAQAKLSLQSWSDVTNIHFVDAGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYN AGEGDPTYADATYAEDTRAYSVMSYWEEQNTGQDFKGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSANSSSSKLVFSVWDAGGNDT LDFSGFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTFVYGDIAESSAAAPDT LRDFVSGQDKIDLSGLDAFVNGGLVLQYVDAFAGQAGQAILSYDAASKAGSLAIDFSGDAHADFAINLIGQATQADIVV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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