Pseudomonas aeruginosa AZPAE14373, NQ52_RS28960

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR32305 - - - 1 415 4.1E-75
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 1 405 1.1E-104
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 265 353 3.66E-34
Gene3D G3DSA:4.10.220.110 - - - 115 178 1.1E-58
SUPERFAMILY SSF69279 Phage tail proteins - - 1 78 1.87E-30
SUPERFAMILY SSF69279 Phage tail proteins - - 84 265 3.91E-42
Gene3D G3DSA:2.30.110.50 - - - 83 223 1.1E-58
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 287 354 5.1E-15
Gene3D G3DSA:3.55.50.10 - - - 1 82 1.1E-58
SUPERFAMILY SSF69349 Phage fibre proteins - - 343 462 8.63E-30
Pfam PF05954 Phage tail baseplate hub (GPD) - - 1 221 2.8E-58
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 1 423 0.0
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 256 357 5.6E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.