Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_32, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AATGCCTGACACGGGACGCTGCGCATGGCGTGGCCCTACAGCGGATCCTCGGGCATTCCTCGATGACGATGCGGTATGCGCACCTAACGCCGGAGCACTT GGAATCGGCGATGCGCTTTTCTCCGATTACTCAGTCTGGCTACAAATTGACCACATGAGGATCTGTGGTAATCTGTAGTGAAGTTAACGCTTAACGTTAA GGGTTAATGAATGATTCTGACCTTTCGCTGCGACGAGACTCGTCAGCTTTTTGAGACGGGTCTTTCGAGGCGGTGGGGAGCGATCCTCACAGTCGCTACG CGTAAGCTCGCAATGCTTCATGCGGCTATGGAGCTTCGAGACTTGCGCTCTCCACCTGGAAACCGGTTGGAGCCGTTGCAGGGAAAGCGGGCGGGCCAAC ATAGCATCAGGATCAATGACCAGTGGCGTGTCTGTTTCGTCTGGACGGATGCGGGTCCCGAAGAAGTCGAAATAGTTGATTACCACTGAGGAGGTGGACC
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DNA Sequence for Gene |
>NQ52_RS28690
ATGGCTACCAATGGTATGCGCCCCATCCATCCTGGGGAAATATTGCGCGATGAGTTTCTGATGGAGTTGGGTATCTCTCCAGCTGCTCTAGCACGCGCTT TGAAAGTCTCCGCTCCGACAGTGAACGATATCGTTCGTGAGCAGCGTGGTATCTCCGCAGATATGGCGATTCGTCTGGGGCGTTACTTTGATACGTCCGC TCAGTTCTGGATGAATCTCCAGAGTGAGTATTCGTTAGCAACTGCTTATGCGGCGAATGGCGAGCAGATCGAACATGAGATTGAGCCGCTGCTTGCTCAC GGATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGTGACGTTGATCGTAGAGCCCCGCAGATGCGGGGCTTTTTTATGCGAACCGTAAATCGGTAAAGGGGGGCGTAGACGGTTTGTAGTCGGTTTGTAGTC TGCCGACCAAAACAAAAAGGGGTTAGCTTGCGCTAACCCCTTGAAAAATATGGTGGCTACACCGGGACTTGAACCTGGGACATCAGCATTATGAATGCTG CGCTCTAACCGACTGAGCTATGTAGCCGAGTGGCGCGCATTTTCCGCATACCGGCTGGGGCTGTCAAGCCCCGGTTCTAGATAATTTTCTGTTCTTTCAA TCGTTTAGACGGAAGGTACGGTCCCGGGTCGCTGGACTTGCCGTCCCGCCCCAGCACAGTGGCGCCTGCGGGGCGATAGAGGCCTCAGGGGCATGCAATT GCCGGCGGTACTCGCCGGGCGTCCTTTGGGTCATCTCGCGGAACCAGCGATTGAAAGAGGGACCTTCCTTGAAGTTGAGGCGCCGGCTGATGGCCTCTAC
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Amino Acid Sequence |
>XRE family transcriptional regulator
MATNGMRPIHPGEILRDEFLMELGISPAALARALKVSAPTVNDIVREQRGISADMAIRLGRYFDTSAQFWMNLQSEYSLATAYAANGEQIEHEIEPLLAH G
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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