Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCGCCGCTGGCCTTCCGCATGCGCCTGGCGCCCTGGTCGACATTGCTCGGCCTGGCGCTGATGGCGGCGATCCTGGTCACCACCTTCTTCACCGAGGC GTTCCGCATGACCCTGGTCTTCGGCGTGCCGTTCCTCGCGCTGCTCAGCGCACTCTACCTGGTCTTCGTCCGCAAGCCCGGCAGGGATTGTCCGATAGAG CGGGCAACGCCCTAGGCGCTCTCCGCCCTGCGAACCTGGTGCGCAGGGCGAAGCCCGACCGGCGCGCCCTTTCCGGACCGGGCGGTTCCGTTCCCCATAC CTTTTCCGTCGCACAAAAAGCATTACCCGCCGGCCGCCGCGACTCCGTAGCGTAGTGCCCAACCGGACGTTCCGGCCCGCGGCGCGCCGCGGCCGGCGCG CTCCCGTCAGGGACGAAGTGGCGGCACGCCCAGCCATCGAGCGCACTGCATCGCTCTGCCCTGTGGGGACGCAGACGTCGTCAGCCATGAGGGGAACACG
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DNA Sequence for Gene |
>NQ52_RS06745
ATGCATCCGACCTTTTCGCGGGTCCTGTTGGCCGCCGCACTGGCCGCCGCCGGCAACCCTGCCGTCGCCACCGAAATCCAGCTCGAGCAAGGCTGGAACG CCGAGCAACGCGCCTCCTGGTACGACGCCTCGCTCGGTTCGCGGCTGCTGCCGCTGGCCTGGGCCCAGGCGCTGGAACGTCCGGACAGCGAGGAACGCCT GTTCTCCGAAGACAACGCCCGGCGCCTCGGCTTTCCCCTGCGCAACTGGCAAGGCGGCGAACTGCGCCTGCCGCGCGGCTTCGCCCTCGACCAGCAGGAC GACAGCCAGTTCTCCGACACCCGCCTGCGCTGGAAAGCCCGCCAGTCGTCCAGCGAACCCTGGGTCGGGCTGAATTGCGCCGGCTGCCACTCCACCGACA TCAGTTACCGCGGCAGCGAACTGACCGTCGACGCCGGCGCCACCCTGGCCAACGTCCAGGCGATCTTCGACGAAGTGCTCGCCGCGCTGCGCCGCACCAG CGACGACGGCGACAAGTTCGCGCGCTTCGCCGGCAACGTCCTCGGCAGCGAGGACAGCCCGGCCAACCGCGAGCTGCTGAAGGCCGCCCTGGTCAAACGC GCGGCGCTGATCGACACCCTGCTGAGCATGTCCGCCACCGACCTGCAACCCGGCCCGGGGCGCCTCGACGCCACCGGCCAGTCGCTCAACCGCGCGGCGA TCAACTCTGGCGCCCGTCACCTGCAAGCGAACCCGACCGACGCGCCGACCAGCTTCCCGGCACTGTGGCACACGTTGCAGATGGACAAGCTGCAATCCAG CGGATTCGTGCCCAACGTCAAGGTCCTCGACCTCAACGGCCAGGTCTTCGACCTCGGCTACCTGGCCGGCGACATCGGCGTGGTCCAGGGCGACTACGGC GACGTGGTCAGCCATCCGCTGTCCGGCCTGGAGGGCTACATCTCGAGCATCCGCGTGGACAACCTGACCCGTGTCGAGGGCCTGATCCACAAGCTCAAGG CGCCGGCCTGGCCAAGCCAACTGTTCGGCGCCCCGGACCGCGCCAGGCTGGCCCAGGGCAAGCGCCTCTACGAGGAGAACTGCGCGGCCTGCCATGCGAG CATCGGCCGCGACGACCTGCAAACCCCGATCAAGGTCCGCCAGGTGCGCCTGAAGGCCCATGGCGACGACGCGCCGATCGGCACCGACCCGTGGATGGCC TGCAACACCTTCACCTTCAGCAGCCCCAGCGGCAACTACTTCGGCCTGTTCCGACCGTCCCTCGGCACCCCCAGCGGCGTCGGCATCGTCGGGCGGACCT CGAAGATCGCCGACATGCAGGTCCCCGAGGTGTTCCAGATCATGCTCGGCAAGAAAGGCCAACTGGCCGACGGCATCGCCGAGATCATCCACGCCATCGT CACCGGGCAGCAGACCCTGCCCGGCTCCGACAGCCTGCAAGCGGTGCCCGCCGGACAATTGTTGCTGGCCGGCGGCGACCCGGCCGGCAGCCAGGCGCCG AGCCTCGCCGCCGGCGAAGTCCCCGCCGACAAGAATGCGCGCAAGGACTACTGCCTGAACACCGAGCATCCGTTCCTCGGCTACATCGCTCGCCCGCTGA ACGGCATCTGGGCCACCGCGCCCTACCTGCACAACGGTTCGGTGCCGTCGCTGTACGACCTGCTGCTGCCCCAGGAGCAACGGCCGACCACCTTCTACAC CGGCAGCCACGAGTTCGATCCGAGCCGGGTCGGCTACCTCACCGGGCCCGGCCCGGACAACGCCTTCCTTTTCGACACCCACCTGGAAGGCAACTCCAAC GCCGGCCACGACTTCGCCCGCGAGTACGACGAAAGCCAGCGCCTGGCGCTGCTCGAATACCTCAAGACCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGCCCCGCCCACATGCCCAATAGAGAGAACCGCCCGATGACCCTATCGCGACTCAGCCTTGCCATCCTTTCCGTCCTCGCCGGTGCCCCGGCATTCG CCGACGACAGCGGCGTCGACCTCGACCAGGGCTGGAACCAGACCCAGAAGACCGCCTGGCTGGAAGCCGGCCAGGGCTCGCGGATGCTGCCGCTGGCCTG GCTGGTGGCGCTGGAGCAGCGCGCCAGCGAAGAACCGCTGATGTCCGATGCGCTGATCCGCCAGTACGGCTATGTCCCGCACACCCTCGGCGGTTCCAGC GTGAAGGTGGTGCAGGGCTACGCGGTCGACCGCAGCGACGACAGCGACCTGACCTTCACCAAGCTGCGCTGGAAGGCCCTGCAGGGCTCCAGGGAACCCT GGGTCGGGCCGACCTGCAGCATGTGCCACACCTCGCACATCAGCTATCAGGGCACCCAGTTGACCGTCTACGGCGGGCAGACCATGGGCGACCTCGCCGG
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Amino Acid Sequence |
>hypothetical protein
MHPTFSRVLLAAALAAAGNPAVATEIQLEQGWNAEQRASWYDASLGSRLLPLAWAQALERPDSEERLFSEDNARRLGFPLRNWQGGELRLPRGFALDQQD DSQFSDTRLRWKARQSSSEPWVGLNCAGCHSTDISYRGSELTVDAGATLANVQAIFDEVLAALRRTSDDGDKFARFAGNVLGSEDSPANRELLKAALVKR AALIDTLLSMSATDLQPGPGRLDATGQSLNRAAINSGARHLQANPTDAPTSFPALWHTLQMDKLQSSGFVPNVKVLDLNGQVFDLGYLAGDIGVVQGDYG DVVSHPLSGLEGYISSIRVDNLTRVEGLIHKLKAPAWPSQLFGAPDRARLAQGKRLYEENCAACHASIGRDDLQTPIKVRQVRLKAHGDDAPIGTDPWMA CNTFTFSSPSGNYFGLFRPSLGTPSGVGIVGRTSKIADMQVPEVFQIMLGKKGQLADGIAEIIHAIVTGQQTLPGSDSLQAVPAGQLLLAGGDPAGSQAP SLAAGEVPADKNARKDYCLNTEHPFLGYIARPLNGIWATAPYLHNGSVPSLYDLLLPQEQRPTTFYTGSHEFDPSRVGYLTGPGPDNAFLFDTHLEGNSN AGHDFAREYDESQRLALLEYLKTL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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