Pseudomonas aeruginosa AZPAE14373, NQ52_RS26995

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_25, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTCCGCCCACAACATCGCCATCACCAACCACGAAGTGGCGGCCTGGCTTGCCGGACAGCCGCTACCCCACCGCCTCAGCGATGCCCAGCAGAACCATGC GCGGCTTGCGACCATAGTTGCCCTTAAGGACGTTTCGCCGCCTTCGGCTGGCTGTTCCGCCCATGTGAGATGGAACCCCACAGCGACCAACCCGCTGAAC CGGATACGTCCTCCGGCAATCGGCCTGGCTCATGAGCTGCTGCATGCCTACTACAGTTGCCGAGGCGCACAACCCGGCTACGACGACAACCACTACTCCA CGGTACTGTTCGAATACCGCTGCGTCGGCCTCGGCCCCTGGGACGAAGCACCATTATCGGAAAATGCCCTACGCAAGGAATGGTGGAGCTATGCCTGCCA GCAGGTGCCCGGAAGCGACCCAGAGAACAGGAAGGCCATCGGCAAACGCATCAGTTACATGTAGTCGTCGCCGCTGTCCCGACAGAAACGAGGGACCCAG
DNA Sequence for Gene
>NQ52_RS26995
ATGCCCCGTCCCACCGATAGCACTACCAGCCTCTCCCTGACCGCCTCGGCGCTGGCAGCCCTGTTCCCGGAGCGTCTGGCCGGGGAAGAACGCCTGAACG CACTGCCCGGTTGGGAACTGCTGGGCTACAGCGCCAGCCCCTTAGCCCTGGACGGCGCAATCGCCACCCATCTCACCGCCACCCTGCACAACGACGCCGA CCAGCGTCCGCTCGACGGCCTGGTCGCGGAGATCCGCCAACTCCCCGGCGATGCCAGCGCCGAGCGCTACCAGGTGCTGTTGCGCCCCTGGCTCTGGTGG CTGACGCTGGCCAGCAACAACCGGGTGTTCCAGAACCTCGCCACCAGCGACATCGTCACCCAGGTCTTCGACCAGCACGGCTTCAGCGACTACCAGTTGC AGCTCAGCGGCAGCTACCAGCCCCGCGAATACTGCGTGCAGTACGGCGAGAGCGACCTCGCCTTCGTCTCGCGGCTGCTGGAGGAAGACGGCATCTTCTG GTTCTTCACCCATGCCGCCGGCAAGCACACCCTGGTGCTGGCCGACAGCAACGACGCCTTCCCGCCGATTCCCAACGGCCCGCAAGTGGCCTACCTGGGC CAAGGAATCGGCGTGCGCGAGTTGCAGGGCGTGCGTTCGGCGCAGTACAGCCTCCAGGCGGTATCCGGGACCTACAGCGCCACCGACTACGAGTTCACCA CCCCGGGCACCTCGCTGTACTCCCAGGCCGAGGCGGTTTCCGGCGCCGCCGGCGTCTACCAGCACCCCGGCGGCTACACCGCCAAGGCCCAGGGCGACAG CCTGACCAAGCAACGCATCGACGGCCTGCGCAGCCAGGAGACGCGCCTGATCGGCGAGAGCGACTGCCGCTGGCTGGTGCCCGGCCACTGGTTCACCCTC AGCGGGCATGACGACGATTCGCTGAATATCGACTGGGTGCTGACCTCGGTCACCCATGACGCCAGTCACGCGCACTACCGCAACCGCTTCGAGGCGATCC CCAAGGCCACCGCCTACCGCCCCGCGCGGGTCACGCCCAAGCCACGCATGCACACCCAGACCGCCCTGGTGGTGGGCAAGGCCGGCGAGGAGATCTGGAC CGACCAGTACGGCCGGATCAAGATCCAGTTCCCCTGGGACCGCGACGGCAAGAACGACGAGACCTCCTCCTGCTGGGTGCGCGTGGTGCTGCCCTGGAGC GGCAAGGGCTTCGGCATGCAGTTCGTGCCGCGCATCGGCCAGGAAGTGATCGTCACCTTCATCGACGGCGACCCGGACCGCCCGCTGATCACCGGCTGCG TCTACAACGGCGACAACACCCTGCCCTACGCGCTGCCAGACAACCAGACGCAGTCCGGGATCAAGACCAACTCGTCGAAGGGCGGCGGCGGTTTCAACGA GCTGCGTTTCGAGGACAAGAAGGACGCCGAGGAAGTCTTCCTCCAGGCGCAGAAGGACCTCAACGTCAACGTGCTCAACGACAGCACCGCCAGCATCGGC CACGACGAGACCCTGACGGTGCAGAACGCCCGCACCCGCACGGTGAAGGAAGGCGACGAGACCGTCACCCTGGAGAAAGGCAAGCGCAGCGTGACCATCC AGACCGGCAGCGACAGTCTGGATGTGAAGGACACGCGCACGGTGACGGTGGGCGCCGACCAGACCCACAGCACCGGCGGCAACTACAGCCACAAGGTCAG CGGCAACTTCGAGCTGACGGTGGACGGCAACCTGACCATCAAGGTCAGCGGCACCCTCGCCCTGCAGAGCGGCGGCAGCCTGACCCTGAAGAGCGACGCC GACCTCGCCGCCCAGGCCGGCACCTCGCTGACCAGCAAGGCCGGGACGTCGCTGACCAACCAGGCCGGCACCTCCCTCACCAACAAGGCCGGCACCAGCC TGACCAACGATGCCGGCGTCAGCCTGACCAACAAGGCCGGCGCCGAACAGACGGTGGACGGCGGCGGCATGCTGACCATCAAGGGCGGTCTGGTAAAGGT CAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGAAGCGCATGGCGGCATCCGGCAAGCTCGACCTGGTTCGTGGCGACAGCCATCTCGCCGGCAACCTGCTCGACGGCAGCCTGGAAGGCCCGTTGCGC ATCGACGAGCACGACAGGCCGCAGGCCAGCCTCGGCTACCGGCAGGGCCAGTTGCACGGCGCCAGCACCCTGTTCCATCCCAACGGCAAGGTCTCCGCGC AACTCGCCTTCGTCGACGGCAAGCTGCACGGGCCGGTCAGTTTCCATGCCGCGGAAGGCTGGTTGCAGCGCAAGGCGCACTACCGCAACGGGCTGCTCCA CGGCGAAGCGCTCAACTATTTCGCCAACGGCCAGGTGGCCGAGCGCGAGCATTACCGCGACGGCGTGCGCGACGGGGTCCACCAGCGCTTCCATGGCAAT GGCCAACTGGCCTTCGACGGACGCTACCTGAACGGCCAGCTACTGGACGGCGCCCAGCCGTTCGCCGATGACGGCCGGCCGCTGGACAGCGAGGGCAGGC
Amino Acid Sequence
>type IV secretion protein Rhs
MPRPTDSTTSLSLTASALAALFPERLAGEERLNALPGWELLGYSASPLALDGAIATHLTATLHNDADQRPLDGLVAEIRQLPGDASAERYQVLLRPWLWW LTLASNNRVFQNLATSDIVTQVFDQHGFSDYQLQLSGSYQPREYCVQYGESDLAFVSRLLEEDGIFWFFTHAAGKHTLVLADSNDAFPPIPNGPQVAYLG QGIGVRELQGVRSAQYSLQAVSGTYSATDYEFTTPGTSLYSQAEAVSGAAGVYQHPGGYTAKAQGDSLTKQRIDGLRSQETRLIGESDCRWLVPGHWFTL SGHDDDSLNIDWVLTSVTHDASHAHYRNRFEAIPKATAYRPARVTPKPRMHTQTALVVGKAGEEIWTDQYGRIKIQFPWDRDGKNDETSSCWVRVVLPWS GKGFGMQFVPRIGQEVIVTFIDGDPDRPLITGCVYNGDNTLPYALPDNQTQSGIKTNSSKGGGGFNELRFEDKKDAEEVFLQAQKDLNVNVLNDSTASIG HDETLTVQNARTRTVKEGDETVTLEKGKRSVTIQTGSDSLDVKDTRTVTVGADQTHSTGGNYSHKVSGNFELTVDGNLTIKVSGTLALQSGGSLTLKSDA DLAAQAGTSLTSKAGTSLTNQAGTSLTNKAGTSLTNDAGVSLTNKAGAEQTVDGGGMLTIKGGLVKVN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site