Pseudomonas aeruginosa AZPAE14373, NQ52_RS26925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_25, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCGACCGCAGCCTGGAACGCGGCGCCGACCAGGTGATCGCCTGGAGCCTGTACTCGGGCGACCAGGAAAGCCGGTTCCCCGGCGCGCAGGACAAGGGCC TGACCTGGAACGTCGGCGATCCGCTGAAGATCATGCTGCGCTGGGCGAAGAACGGCTCGCAGCGTCCGGCAGACGACCCGCGCCAGGCCAGCCTGGCGGT GGCCGACCTCGAGGCCGGCTGGAGCTACCAGGGCTCCTGGGCGCTGCTGCGCATGATGCGTGCGCACTTCTCCCGGCAGCGCCCGCCGAACGTCGACTAC ACGGAGTTTCCGCTGGTCCTGCAACTGCCGGTGTATGCGCCCTACAGCCCGGAAAACGAGGCGCGGATGTTCCTCCGCCTGTCGTTGATGAGCCTGGGCG GCAAGACCCCGCTGTCCATCCAGCCGCTGCCGGTGCGCGCGCCGCAATCGCCGTTCGCGACGCTGTTGCCGGCCACCGTCGCCAGCACCGGAGGTATCCC
DNA Sequence for Gene
>NQ52_RS26925
ATGACCCTGCCTCTTTCCGGCAACGCCCTGTCCCTGGAAGTGCTGCTCGAACCCATCGCCGCGGAACAGCCGTGCGGCCCCAGCCTGCGCTACGACCCGG ACTACGACCGCCTGCGCGAGTTGCGCCGGGAGGACGACAGCAGCCTGCCGACCGGCGTCTGGCAGGCGGAGGCCAAGCGCGCCGACTGGGCCGCGGTGGA GCAGTTGGCCAGCGAACTGTTGCAGCGGCGCAGCAAGGACCTGATGCTCGCCGCCTGGCTCGGCGAGGCCTGGCTGCAACGCGGCGGGCTGGGCGGATTG CAGCGCGCGCTGGTGCTGCTGGCGGAACTCTGCGAGCGCTACCCCGAGGAGGTGCATCCGCAAGCCCAGGACGGCGACCAGTCGTGGCGGGTGCCGCCCA TCGACTGGCTGTTGCGCCGCTATGCCGAGCTGCTGCACACGCGCCTGCCGCTGATGGGGCAGGGCGCGTTCGCCGAGATCACCCTCTATGCCTGGCAGAG GTTGCAGCGCCAGCAGGTCGCCAGCGGCGACAGCAAGAGCGCCAAGGCGGCGCTGGAAGCGGCGCAACTTCAGCAGAAGAAGCTCGACGAAGCGTTGCGC GCGGAGCCCCTGGTGCAATGGCAGCGCAAGCAGGCCAGCCTGTTCGCCTGCCAGCAGCAACTGCAACGCCTGGAACAGTGGTGCGACCGCTGCCTGGGCG AACTCGCCCCCAGTTGCCAGCCGCTGCGCGAGGTCATCGCGCAATGGCTGGCCTTGCTCAAGGAGTTCATCGCCATGCACCCGCAAGCGCCGCTGCCCGA AGAACAGCCACCGGTCGCGGAGGCGGACGCCGCCGAAGGCGACGCGGACGGCGAGGAAAGCGTCCCGGCGAGCGCGCCGAGCGGACCGGCTGGCGCGCCG ACCAGTCGCGAGGACGCCTATCGGCAACTGCTGCTGATCGCCGACTACCTGGCGCGCACCGAGCCGCACAGCCCGGTTCCCTACCTGATCAAGCGCGCGG TGGAATGGGGCAACAAGCCGCTGAGCGAGCTGCTGGCGGAGCTGATCAATGCGGACTCGGAGGCGCGCCGGGTCTGGTCGCTGCTTGGCGTACTGCCCTA G
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGGCGTGGCTATATCTTTTATTCGAATATATAAATACGAATTCAGAATTTTTTAATCTATGGGTTCCTGGGGCAAGATGGGCGCACATTCCCCGGCTCG GAACCCAGCATGTCCGTCATCACCCATCCCCACGCCCGCGAGCTGACCAAATCGGTGCGCGCCACCGTGCTGGTGTTCAACGACCCCCGTTCCCGCGAGC TGCTGGAGCGCATCGAGCGCCTGGCGCCCAGCGAGGCCAACGCGCTGGTCATCGGCGAGACCGGCACCGGCAAGGAGCTGGTGGCGCGCCATATCCATGC CCTCAGCGGACGCAGCGGCGGCCCGTTCGTCGCGGTCAACTGCGGTGCTTTCGCCGAGAGCCTGGTGGAGAGCGAGCTGTTCGGCCACGAGAAGGGCGCC TTTACCGGTGCGTTGCAGAGCAAGGCCGGCTGGTTCGAGGCGGCCAACGGCGGCACCCTGTTCCTCGACGAGATCGGCGACCTGCCGCCGAGCATCCAGG
Amino Acid Sequence
>type VI secretion protein
MTLPLSGNALSLEVLLEPIAAEQPCGPSLRYDPDYDRLRELRREDDSSLPTGVWQAEAKRADWAAVEQLASELLQRRSKDLMLAAWLGEAWLQRGGLGGL QRALVLLAELCERYPEEVHPQAQDGDQSWRVPPIDWLLRRYAELLHTRLPLMGQGAFAEITLYAWQRLQRQQVASGDSKSAKAALEAAQLQQKKLDEALR AEPLVQWQRKQASLFACQQQLQRLEQWCDRCLGELAPSCQPLREVIAQWLALLKEFIAMHPQAPLPEEQPPVAEADAAEGDADGEESVPASAPSGPAGAP TSREDAYRQLLLIADYLARTEPHSPVPYLIKRAVEWGNKPLSELLAELINADSEARRVWSLLGVLP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site