Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_24, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCCGGCCGATATCCGCCTCGTTGCCGTAGATCTGCGCGGTATCAATGGCTCGATAACCCAGCTCGAGGGCGCTGCGCACCGAGTCGACGACGACCTGGC CGGTAAGGCGGAAGGTGCCGAGGCCGAAGGACGGGAGGGGGTGGATGGTGGAAGACATGGCTGCGCTCCGTGGGCGGGATGGCTCGAAGGAAGCGCAGTG TGGCGGCTTACATCTCTTCGATTAAGACCCGAATCGAGCAAATTCATTTGCGCTGGAGTCACGAATCCAGGCGGCCTTCACGGGAGGTATCCAGCGGAAA TTCCCGCCAGCCGCTGGCAGAACGCAGTTCATCGGATTCCCGCGAATACCACTGATAATGATAATCTCTATCATTTACTCCATTTTTACATTTACATACA CTTGCCCCGCCGCGAATTCCTACGCCGGTTTCCCACATAAACAAGAAACGCAGCCGGTCGCGCCAACGGCCTGCCTGCGCCGCCATCCAGGACACTGCAG
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DNA Sequence for Gene |
>NQ52_RS26050
ATGAAACACGTCGTTTCCAGTGCGTTATTGCTCGGTCTCTCCTCGCTTTCCCTGGCCGCACAGGCCGCTCCCATCGCCCTTGACCTTCCCGCCCAGCCCC TGGCCGCATCCCTCGAGCAATTGCAGGGCGCCAGCGGCCTGCGCATCCGTTTCGACCGCGCGGCCGTGGCCGACCGGCGCGCACCGGCCCTACGCGGCAC GCTGGAGCCGAGCGAGGCACTGCAGCGTCTGCTCGCAGGTTCCGGACTGAGCGGGGAGGTACGGGGCGGCGACGCCTGGGTCGAGGCCGCGCCGACAGGT GCCGGCATCGCCCCCGGCGACAGCGTCGACCTCGGCGCGCTCAGCGTGGTCGCCACCCAGGACCCGGCCACCGCCGCCATCACCGAAGACAGCGGCTCCT ACACCACCCGGGCGATGCGCACCTCGACCAAGCTGGCGATGTCGATCCGCGAGACCCCTCAGTCGGTCAGCGTGGTCACCCGCCAGCGCATGGACGACCA GGGCATGCGCGACCTCAACGACGCGGTGAAGGGCGTCACCGGCCTCACCGTGCAACAGTACGGGCCGGCCCGGGTGAAGTACGCGGCGCGCGGCTTCGAC GTCGACAACATCATGTACGACGGCCTGCCGACGAGCATTTCCACCTATACCCAGGACGTCATTTCCGCCGCCGACCTGGCCATGTTCGACCGCGTCGAAG TGGTGCGCGGTGCCACCGGCCTGATGCAGGGCGCAGGCAACCCGGCGGCGGCGATCAACATGGTGCGCAAGCGTCCGACCCAGGACTTCCGCGCCTCCCT GCAAGGCAGCGTCGGCACCTGGGACCGCTATCGCAGCGAGGCCGACGTTTCCGGTCCGCTGAACAGCGAAGGAACCCTGCGCGGCCGCGCGGTGGTCGCC TACCAGAAAGGCAACAGTTTCCAGGACCACGTCAGCAGCGAACGCGGCGTGTTCTACGGGATCGCCGAAGCCGACCTGAGCCCGGACACCACCTTCGCCA TCGGCGCCTCGAACCAGAACGACAACCGCAACGACAACTGGGTAGGCCTGCCCAGCCCGCTGGGCGGCCGCCACCTGGACCTCAAGCGCTCGTCCTACTA CGGCGCCGACTGGTCCTACTGGGATACCGACACCACCCACCTGTTCAGCGACCTGACCCACCGCTTCGCCAACGGTTGGCAGATGAAGCTGGCCGCCGAC AAGCTGTGGGCGCGAATCAACATGCTCGGGCTGTACAACGACTGCTACTACTCGACCACCGGCTGCGCCAGCATGACCCAGAACCCCGGCGACTACAGCT ACACCGACGACCACGACAGCTATGACGCCTATGCCAACGGTCCCTTCCAGTTGCTCGGCCGCGAGCACGAGCTGGTGGTCGGCGCCAGCTATCGCCAGGA ACGCTTCGACGGCCACGGCGGCTGGGGCAGCCTGTTCAACAAGGACGGCACCCCGACCGGGCCGATGGACCCGACCCAGTGGGACCCGAGTTCGACCCTC AAGCCGAGGCTGAACACCAGCCTGTGGGGCATGAAACTCGACCAGGAACAGAAAGGCGCCTACCTCACCACCCGGTTGAACCTCGCCGACCCGCTGAAAG TGATCCTCGGCGGGCGCCTGGACTGGTACAAGGCCGACGCCGATACCGACAGCTACAAGGTCACCCGCAACGTCACCCGCTATGCCGGGGTGATCTACGA CCTGAACCAGACCTACTCGGTCTACGCCAGCTATACCGACATCTTCAAGCCGCAGAGCAACTTCGACGCCGGCGGCGGCCTGCTCGACCCGATCACCGGC AAGAACTACGAGATCGGCCTGAAGGGCGAACACTTCGGCGGCGCGCTCAATTCGCAGATCGCGCTGTTCCAGATCGACCAGGAAAACCGCGCCACCGAGG ACGTCGGCGGCCCCTCGCCATGCCCCTTCAGCCCCACCTCGCGCTATTGCTCGCGCGCTTCGGGCAAGGTCCGCAGCCAGGGCGTCGACCTGGAGCTGAG CGGTGCGCTGAGCGACGACTGGCAGATGATGGCCGGCTATACCTACGTCGACGCCAAGTACAAGCACGACAGCAACAAGGCCAACGAGGGCAAGCCATTC GACGCGGCCAAGCCACGCCACCTGTTCAAGCTCGCCACCAGCTACACGCTGCCCGGCGAACTGCACAAATGGCGCGTCGGCGGCGACCTGGCCACCCAGA GCAAGACCGAGGACAGCAGCACCGGTTTCCAGCAGGGCGGCTACACCGTGGTCAACGCCATGCTCGGCTACAAGGTCAGCGAACGGATCGACACGCGGCT GAACTTCAACAACCTGTTCGACAAGTACTATTACAGCGGCATCGACTTCGGCAACCTCAACTACGGCGAGCCGCGCAACCTGATGTTCACGGTGAAGTAC TCGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCCGGACCGCCGGCGTGCCTCCGCAGGCGCGGCGGCGGTGTCCGAACGGCCCTTCCAGGCGCCTCAGCAGGGCCGATAGCGGCGCTCGAACTCGCTCGC CAACTGCTCCAGCGTGACGCTCCCCAGGCGCTCCAGGAGCAACGCCTGCGCCGCCTCGAACGCCTCGCCGAGCGCTTCGTTGACCGCCTGCTCGACCAGG CATTCCGGATGATCGGTAGACAGGCCGATGGCGAAGATCGAGGACGCTCCCAGCGCCTGGTGGATATCCAGCAAGGTGATGTCCGCCAGCGGCTTGGCCA GCCGCCAACCGCCGCGATGGCCCTTCTCCGAACTCACGTAGCCTTCGTTCTTCAGCAGCGCCATGGTCCGCCGCACCACCACCGGGTTGGTGCCGAGCAT CTGCCCGATGGCTTCGGAGGTCGCCGGCCCTTCGTGGCGGGCCATATGGATCAGCACATGAAGCATGCGCGAGAGGCGGGTGTCGTTTCTCATGGACGGC
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Amino Acid Sequence |
>type I ferripyoverdine receptor, FpvB
MKHVVSSALLLGLSSLSLAAQAAPIALDLPAQPLAASLEQLQGASGLRIRFDRAAVADRRAPALRGTLEPSEALQRLLAGSGLSGEVRGGDAWVEAAPTG AGIAPGDSVDLGALSVVATQDPATAAITEDSGSYTTRAMRTSTKLAMSIRETPQSVSVVTRQRMDDQGMRDLNDAVKGVTGLTVQQYGPARVKYAARGFD VDNIMYDGLPTSISTYTQDVISAADLAMFDRVEVVRGATGLMQGAGNPAAAINMVRKRPTQDFRASLQGSVGTWDRYRSEADVSGPLNSEGTLRGRAVVA YQKGNSFQDHVSSERGVFYGIAEADLSPDTTFAIGASNQNDNRNDNWVGLPSPLGGRHLDLKRSSYYGADWSYWDTDTTHLFSDLTHRFANGWQMKLAAD KLWARINMLGLYNDCYYSTTGCASMTQNPGDYSYTDDHDSYDAYANGPFQLLGREHELVVGASYRQERFDGHGGWGSLFNKDGTPTGPMDPTQWDPSSTL KPRLNTSLWGMKLDQEQKGAYLTTRLNLADPLKVILGGRLDWYKADADTDSYKVTRNVTRYAGVIYDLNQTYSVYASYTDIFKPQSNFDAGGGLLDPITG KNYEIGLKGEHFGGALNSQIALFQIDQENRATEDVGGPSPCPFSPTSRYCSRASGKVRSQGVDLELSGALSDDWQMMAGYTYVDAKYKHDSNKANEGKPF DAAKPRHLFKLATSYTLPGELHKWRVGGDLATQSKTEDSSTGFQQGGYTVVNAMLGYKVSERIDTRLNFNNLFDKYYYSGIDFGNLNYGEPRNLMFTVKY SL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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