Pseudomonas aeruginosa AZPAE14373, NQ52_RS24805 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCGCCGGGCAAGAAGAACAGCACCATCCACTTGTTGTCCGGCGGGGAAAAGGCGCTGACCGCGCTGGCGCTGGTATTCGCCATCTTCCAGTTGAACCC GGCGCCGTTCTGCATGCTCGACGAAGTCGATGCGCCATTGGACGATGCCAACGTCGGACGTTATGCGCGATTGGTGAAGGAGATGTCGGAAAAGGTGCAG TTCATCTATATCACCCACAACAAGATCGCCATGGAAATGGCCGATCAGTTGATGGGCGTGACCATGCATGAGCCGGGCTGTTCACGGCTTGTTGCAGTTG ACGTGGAAGAGGCGGTCGCATTGGCTGAAGCCTGAGTGTCAGGCAGTGTAAACTTGTGCATGGGCATGTTAGTTTAATGGCCACTTTTTGTATCGCGTGG GAAAGTTCTGTCAGAACAAGGTTGGCTCCACGTTTCAAGGGACAGGACGTCCTTTTTTCATTTTTTTATTCACCATTTTCACTAGGGGCTACGGAATTAC
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| DNA Sequence for Gene |
>NQ52_RS24805
|zipA
ATGGATATCGGTCTGCGCGAATGGCTTATCGTTATCGGGCTTATCGTGATCGCCGGCATTCTCTTCGACGGTTGGCGGCGGATGCGGGGCGGCAAGGGCA AGTTGAAGTTCAAGCTCGACCGCAGTTTCGCCAATCTGCCGGACGACGACGGCGACTCGGCTGAACTGCTGGGGCCGGCGCGGGTGGTCGAGCATCGCGA GCCGTCCTTCGACGAACAGGACCTGCCCAGCGTCAGCGCCCGCGAAACCAAGGAGCGCAAGGGCGGCAAGCGCCAGGAAGAGCCGCGCCAGGGCGATCTG GACCTCGACGAGGGGCTGGCCCTGGAGGCGGACCCGAGCGATGCCGCCGAGCCGGTGGAGCCACGCAAGGGCAAGTCGAAGGGACGCAAGGAGAAAGAGC GGGAGAAAGCCCCTGCGGTCGCCGCCGAACCTGCTCCGGTCGACGAGGTGCTGATCATCAACGTCATCGCCCGCGACGAAAGCGGCTTCAAGGGGCCGGC CTTGCTGCAGAACATCCTCGAGAGCGGCCTGCGCTTCGGCGACATGGACATCTTCCATCGCCACGAAAGCATGGCCGGCAATGGCGAGATCCTGTTCTCC ATGGCCAATGCGGTGAAACCGGGCACTTTCGACCTGGACGACATCGACAACTTCAGCACCCGCGCCGTGAGCTTCTTCCTCGGCCTGCCGGGGCCGCGCC ATCCGAAGCAGGCCTTCGACGTGATGGTCGCCGCCGCGCGCAAGCTGGCCCACGAGCTGAACGGCGAGCTGAAGGACGAGCAGCGCAGCGTGCTGACCGC CCAGACCATCGAGCACTACCGCCAGCGCATCATCGACCATGAGCGCCGCAGCCTGATGCAGAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGGCCACAGCCCCTTTCTTCGTGCGGGAGAGGGGGCGAACTACTCTATAGAGCAGCCGAGGCTGCTCTTTTCGTTTCACGGACTCCCACCATGACCGA CACCCAGGCTGCCGCCGAACGCATCGCGCAACTGCGAACCGAACTGGACACTCACAACTACCGTTACTACGTGCTCGACGAACCGAGCATTCCCGACGCC GAATACGATCGCCTGTTCCGCGAGTTGCAGGCGCTGGAGAGCGAGTACCCGCAACTGCTGACGCCCGACTCGCCGACCCAGCGGGTCAGCGGCACGCCGG CCTCGGCGTTCGGCGAAGTGCGCCATGAGATCCCCATGCTCAGCCTCGGCAACGCCTTCGAGGAACAGGACCTGCTGGACTTCGACCGCCGCGTACGCGA AGGACTGGCCGACCTGTTGCCTGGCGGCGACCTGCTCGGCGGTGGCGCGGAGGTCGAGTACAGTTGCGAGCCGAAGCTGGACGGCCTGGCCGTCAGCCTG
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| Amino Acid Sequence |
>cell division protein ZipA
MDIGLREWLIVIGLIVIAGILFDGWRRMRGGKGKLKFKLDRSFANLPDDDGDSAELLGPARVVEHREPSFDEQDLPSVSARETKERKGGKRQEEPRQGDL DLDEGLALEADPSDAAEPVEPRKGKSKGRKEKEREKAPAVAAEPAPVDEVLIINVIARDESGFKGPALLQNILESGLRFGDMDIFHRHESMAGNGEILFS MANAVKPGTFDLDDIDNFSTRAVSFFLGLPGPRHPKQAFDVMVAAARKLAHELNGELKDEQRSVLTAQTIEHYRQRIIDHERRSLMQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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