Pseudomonas aeruginosa AZPAE14373, NQ52_RS22420
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCAGCGAGGAGGCAGTAGCCCCCAACGATTGGATATGCATATTCGCTCCTTGAAATACCGAGGGTTCGGAGCAAATATTAGGAAAACCGGCCATAAGGT TTTGCCAGTTTCGGACGTTTTTTTATCAGTTCGGACTGGCCTGCCCCCCGATTTCAGTACCACGTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAAAC GGCAGTGAAAAAGCGTTTTACCGAAGAGCAGATTCTCGACTTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGGAACTGTGTCGCCGACACGGCTTC AGTGATGCCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCAGACGCCAAACGGTTGAAGGATCTTGAACTGGAAAACAGCCGATTGA AGAAGTTGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCCCAGGGAAAAGGGTAAGCCCGACAGCACGGCGGGAGGCGGTGCAGGAG
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| DNA Sequence for Gene |
>NQ52_RS22420
ATGCAGGCGCGAACCGGCATCTCCGAGCGTCGTGCCTGTCAGTTGATCGGGCTGTCCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTGTGCAAAACA CCGAGCTGCAAGCCCAACTGGTGGAACTGGCCCAAGAGCGCCGGCGCTTTGGCTATCGCCGCCTGCAAATCCTGCTGCGGCGTGCTGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACAGCGGCGGCGCCGCCATGGCGTCGCGGTGGAGCGCGAACGTCTGAGTTTG CCGAGCGCATCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCACTGAGCACCGGGCGGTGGATCAAATGCCTGACGGTGGTCGATGACTTCACCA AGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGCGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGAT CCGCACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACG CAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATCGCGG CCTGGCGGCGGGATTACAACGAACACCGACCGCACGGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAGCT GAAGCAGGAAAAATTAATATCAACCCCAGGGCCTACTAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAACTGGGGGCAGGTCAGATAGACTGGCTAGCCAAGGATCTCTAGCGTCGCGCCAAGAGACTCTTGGCTAAGAAATCGGCGAGGATTC CAACATCCCTCTTTTGGGCCTCCAGGATGCCCTGCACTTCACCTGACAGAACCTCGACCTCCTCCCCATCCACAATCTTTACAATTCTCTTGCGGCCGGA GCTGGTGAGGCTAAGCCTCAACTCCATCGCCGGCCGGGCATTGATGTAAATGCTCTCGAGCAAGCGTTCCATGACTTCGACCACTCCTTAATATCAGTTA GCCATCCCCATACAGGGATTATGCCCTCTAGGACATGAGGGAGTCACCCCTAACGCTGCAAGCAGCAGTTCTGGATACGGACGGGCTGATGGTTTCCTGC TGCCCCATCGCAAGCGATCCTGTCTGCTGTCTATTCCTTCCTCGAAGCGGTACAAGCCCGCACCTCTTCATCGCTTCCCCAAATGGGCCACCACGCCCCC
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| Amino Acid Sequence |
>transposase
MQARTGISERRACQLIGLSRSVLRYQPRASVQNTELQAQLVELAQERRRFGYRRLQILLRRAGVQVNHKRIYRLYRAAGLMVKQRRRRHGVAVERERLSL PSASNQVWSMDFVFDALSTGRWIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPT QNAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHGAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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