Pseudomonas aeruginosa AZPAE14373, NQ52_RS21385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTGATTTCGCGTCATCCCAAGGCCCGCCACCCGTGAGGGAATGGCGGGCCTTGTGCTATGGCGTCCTCGCCTCCTCGGGTTCTCTCGCCCACCCGCATG CAGTCCCGGACATCGAGTCGACCTTTTCCAAGTCAGGCATGGACGGCGACGGGCCGACCCCATTTCCTCCTCGCGGAGGGCGCGCTCGCCATCCTCTTTC TCGGAACGATAGCTGGATTGACACGCCGCCCAGGCTCGCCGGGTAGCAAGCGGTGCCGTGCCGGATGCTTGCCGCCGGCGTGTCATCCGCCTGCCAACGT CTGCTGGAGGCCCAGGGGAAGCGGGCGGTAGAGCCTGCCTGGGAATTTTCCTGACAGTTCTTGGGTAAATTCGCGGGGATGTGTCGGTCCTGTCTTATGT TTCCTTTCCATTCCTTCTGGAAAGATCCGCCACTCTCATCATCTTCGCACCGGTTTCGGCGAATTTCCCAGAATCATCGTACACATTCGGTTGTCAATCC
DNA Sequence for Gene
>NQ52_RS21385
ATGCAACTCAAGACGTTCTGTCGAGCCCTGGTTGTCGTGGCTGCCCTGTTCGTTCCCGCCGGTACGAGCATGGCTGCCGACATATACGCTTTCGACGGTC GCGACATCGCCGTGCCTTCGATTCTCCCTCCCGGCACCATCATGTCGCGCTACACATTCACCCCGCTGCAGGCGTGCGGCAGGAACAGTTGCGAGATCCT CACGGCCTCGCTCTACGACAAGGGCAGCGTCTGGAGTCCCGTTGAGGGACCGGACCTGCAGACCAACGTTTCGGGCCTCTCCGTACGCCTGCTGATCGAT GGCAAGCCGGTCAGCACAAGCTTCAGAGGGGCCTTTTCCCAAGTCGCGGAAGTCCAGTTGGTTCGCGATTCTTCGCCGATTTCCGAAGGACAGTTTTCGA GCGGCGCGTTCAACTCGTACTTCCTGCTCGCCTACAGGGACGGTCTCATCTCGACCGATTCAGTCTCCGTCAGATTGTTGGGGCGCGTCTCTACCATCGA TGCGACCTGCCAGGTCGCCGACCAGACGGTGAAGCTGCAGCCGATCGCTTCCGCCCAGTTGAACGGCGTCGGCACCTATGCGGCCGTTACCCCGTTCAAT CTCGTAGTCGCCGGGTGTCCTCGCGGCTACAACCGCGTCGGCTACAGCGTCCAGCCGGTGGGGGGCGCGGTGGCCGAAGGCTCGGGTGTGCTGCCGCGCC TGGCGGGCAGCACCGCGACCGGCGTATCGATCCGGGTCACCGATGAGGTAGGTGCGCCGCTACGGATGGGCACCTCTTTGCCCGTGACCGCTTACGAGAA GAACACTGGTGGGGCGTACTGGATCCCGATGAATGCGGCATACGTACAGACTGCCGAGAAAATCACGCCCGGCTCGGTCCTGGCCGCGATGGTGATCCTG CTCGACTACCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCAGGGGAGGGCAAGAGCGCGCCTCACCCGAACGCCTCGAAGAACGCCAGGGCCCGCGGGTCGCTGGCATAGGCGATGTTGATACGCAGCCAGTCGCTC TCCTCGCCTTCCGGGCTGAAGCCGCTGCCCGGCGACAGCAGCACGTCCAGGCGTGTCGCCACGGCCTGCAATTCGGCGAACGGGTAGTCGCCGATACGGG CCCAGACGAACATCCCGCCGACCGGTTCGGCGAACACCTCCCAGCCGTTGTCCCCAAGCACCCGCAGGGTCGCCGCCATCTGCCGGGTCAGGCGTTGACG CAGGCGTTGCACCAGCTTGCGGTAACTGCCGTTGGCGAGCATGGTCGAGACCACGCATTCGGCGAAGCGCTGGCTGCCGATGCTGGTGTACATCTTCACA TCCGCCAGGCGCCGGATCAGCTCGGGGCCGGCGATCAGGTAGCCGACCCGTAGCGAGCAACTGAGGGTCTTCGAAAAGCTCGCCAGGTAGATCACCCGGC
Amino Acid Sequence
>fimbrial protein
MQLKTFCRALVVVAALFVPAGTSMAADIYAFDGRDIAVPSILPPGTIMSRYTFTPLQACGRNSCEILTASLYDKGSVWSPVEGPDLQTNVSGLSVRLLID GKPVSTSFRGAFSQVAEVQLVRDSSPISEGQFSSGAFNSYFLLAYRDGLISTDSVSVRLLGRVSTIDATCQVADQTVKLQPIASAQLNGVGTYAAVTPFN LVVAGCPRGYNRVGYSVQPVGGAVAEGSGVLPRLAGSTATGVSIRVTDEVGAPLRMGTSLPVTAYEKNTGGAYWIPMNAAYVQTAEKITPGSVLAAMVIL LDYQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site