Pseudomonas aeruginosa AZPAE14373, NQ52_RS21335
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAGGTGGCGGAAGCGGCTCAGGCGCGGTAGCAGCCAGCGCAGGGTAAGGGTGGAAGGCGCCTTCAGGCGCAGGGTGGCGTCGTCCACACGCAGGGCGGT GCAGGCCCGTTCCAGCGCATCGAAGCCGTCGCGCAGCCCGGGCAGTAGCAGGCGTGCCGGCTCGGTCAGCTGCAACTGGCGGCCATGGCGCTCGAACAGA CGACAACCGAAGTGCTCCTCCAGGGTACGGATGTGCCGGCTCACCGCGCTCTGGGTTATCGCCAGTTCCTCGCCGGCGCGGGTGAAAGAGGCGTGCCGGG CGGCAGCCTCGAAGGCGCGCAGGGCATACAGCGGGGGCAGGCGACGGGTCATTGGGGAATTACCTCTTTCATGACTTTTACTCATGCCTGGCATCTTGTT TTTCCTTTTGTGGAGCCATGCCAGTCGCACCGAGAATAGCCGCATTCTCAACGCCGACAGGCCATCGCGGCAACCATCTCCTCCTGAGCCTTACTCATCC
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| DNA Sequence for Gene |
>NQ52_RS21335
ATGTCCTCGCCATCCCTCGTCGAACTCAAAGCCATCCTGCGCCTGGCGGGCCCGTTGATCGCCGCCCAGCTGGCCTATGTCGCCATGGTCTTCACCGACA CCGTGATGATGGGCAAGCTCGGCCCCGACGCGCTGGCCGCCGGCGGCCTGGGCGCGGTCAGCTACGCCTTCGTCTCGACGTTCTGTGTCGGCGTGGTGGC AGCGGTCGGCAACCTGGTGGCGATCCGTCACGGCTGCGACGACGCCGCTGGCGCCGCCGCGGCCGCTCGCTCCGGACTCTGGGTCGGCGCCGCGCTGGCC CTGGCCGCCGGCCTGCTGCTATGGAACCTGCGGCCGCTGCTCCTGCTCTTCGGCCAGGCGCCGCAGACGGTGGACGGCGCCATGCAGTTCCTCCACAGCC TGACATTCGCCCTGCCCGGCTACATGGCCTTCATGGTCCTGCGCGGCTTCACCAGCGCCATCGACCGCGCCGGACCGGTGATGGCGATCAGCGTGCTCGG CGCGCTGGCCAACCTGGCTCTCAACTATTCCTTCATAGAAGGCCTGTTCGGCCTGCCGCGCCTGGGCCTGGCCGGTATCGGCCTGGTCACCGCCCTCGTC ATGAACTGCATGCCGCTGCTGCTGGCCCTGTATATCCGCCGGCAGCCGGCCTATGCCGCGTACTCGCTGCTGCGCGGACTGGGACGGCCGCAGCGGGCGA TGGTCGAGGAGATCCTGCGCCTGGGGCTGCCCATCGGTGGCACCTACGCGGTGGAGTCGGGGATGTTCACGGTCGCCACCCTGTGCATGGGCATCATCGG CGATCACGCCCTGGCCGCGCACCAGATCGCCATCCAGGCGGTATACGTGGCGTTCATGGTGCCGGTGGGGTTGTCGTACGCCACCACCTACCGCATCGGC CAGCATTTCGGCGCCGGCCGCCTGCTCGAAGCACGTCGCGCCGGGCGCGTCGGCATCGGCTTCGGCGCGCTGTGCATGCTGCTCTTCGCCGGGCTCTTCT GGTGGATGCCGGAGGCCATCATCGGCCTGTTCCTCGACCGCGACGCCCCGGCCAACCGGGAGGTGGCCGCGATGGCCGTCTCGCTGCTGGCGATCGCCGC CTGGTTCGAGCTGTTCGACGGCACCCAGAACGTCGCCATGGGCGCGATCCGCGGTCTCAAGGACGCCCGCACCACCTTCCTGGTCGGCCTGGCCTGCTAC TGGCTGGTCGGCGTGCCGCTGGCCTGCCTGCTGGCGTTCGCGGCCGGCTGGGGCGCCGCGGGCGTCTGGTGGGGGCTGGCCGGCGGCCTGGCCTGCGCGG CCATCGGCCTGACCCTGGCCTTCGAGTGGAAGACCGCGCGGTTGCTGCCGAAAGCCACGGCCAGCAAGACGTCGGCGCTCAATTGCCGAGCGGCTGGCCG CGGTGCGCCGAGCGTTCGCCGATGCCCAGGAAACGCGCCAGTTCCGCCAGCGGCAGCGGCGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCAGTAGCCCTGCACCTGGTCGCAACCGAAATCGCGCAACTGCTCCTGCTGGCGCAGGGTCTCCACGCCTTCGGCAACCACTTCCAAGTTGAGGTTATG CGCCAGGTTGATCATCGCCCGCACCAGTTGGAAGTTTTCCGCCCGCTGGTCCATGCCGCCGACGAAGCTGCGGTCGATCTTCAACAGGGTGATCGGCAGG CTATTGAGGTGGACGAAGGACGAGAAACCGGTGCCGAAGTCGTCCAGCGAAAAGCGCACGCCCAGTTGGCCGAGCGCCTGCATGGTCTGCAGCACCTGGT CGCTGCGCCGCATCACGGCAGTCTCGGTCAGTTCGAACTCGAGCCAGCGCGCGTCGACGCCGTGCTCTTCGATCAACCGTTGCAGGGTCGGCAGCAACTG GCTGTCCTGGAACTGGCGGAACGACAGGTTCACCGCCATGTGCAACGGCTCCAGGCCGCGCCCGTTGAGCCACTGCATGTCGCGCAGGGCGCGGGCGATG
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| Amino Acid Sequence |
>multidrug transporter
MSSPSLVELKAILRLAGPLIAAQLAYVAMVFTDTVMMGKLGPDALAAGGLGAVSYAFVSTFCVGVVAAVGNLVAIRHGCDDAAGAAAAARSGLWVGAALA LAAGLLLWNLRPLLLLFGQAPQTVDGAMQFLHSLTFALPGYMAFMVLRGFTSAIDRAGPVMAISVLGALANLALNYSFIEGLFGLPRLGLAGIGLVTALV MNCMPLLLALYIRRQPAYAAYSLLRGLGRPQRAMVEEILRLGLPIGGTYAVESGMFTVATLCMGIIGDHALAAHQIAIQAVYVAFMVPVGLSYATTYRIG QHFGAGRLLEARRAGRVGIGFGALCMLLFAGLFWWMPEAIIGLFLDRDAPANREVAAMAVSLLAIAAWFELFDGTQNVAMGAIRGLKDARTTFLVGLACY WLVGVPLACLLAFAAGWGAAGVWWGLAGGLACAAIGLTLAFEWKTARLLPKATASKTSALNCRAAGRGAPSVRRCPGNAPVPPAAAAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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