Pseudomonas aeruginosa AZPAE14373, NQ52_RS19795

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAGGCTACAGCCATGTGCTCAACGGGCGCTTCAAGGGCGGCCACATCACCCGCCACTACGGCCAGCCGGAGCAGCACGTCCATGCCGTCCAGCTGGAGCT GGCGCAATGCACCTACATGGACGAGCAGGCCCCGTTCGCTTACCGCGCGGACCTCGCCGAAGCGACCCGCGCGGTCATCCGCGAACTGCTGGAAAGCCTC CTCGCCTGGGGGCACGAGCGCTACGCCTGAGGCGCTCGGAGGCGGCGGACGCCTGGCCCGTCCTGGCGGACGTGAATGCCGCGGATGGGGTGGGGCGTCC GTGTCGGCATTCTGGAAATTTTCTGTTACAAATTTATTGAGGTCAGCGTTGATGCGGCCGGGAGGCCGAGTGCGCAAAGAGTTGCACAACTGTTCTCCTC TATCCTCTCGGCCAGCATTTCCATCGCGCGGGCGCAGGCGCGTCGCGCCCGGAACCGAATACGCCAGGAACGCACGGCTGCGTTTCCAAGAGGACAGTGA
DNA Sequence for Gene
>NQ52_RS19795
ATGTTCGCCCCCGCCAACCAGACGCACTTCAGCCTTCGCATCGAAAACCTCCGGCACGACTTCCAGGTACTCGCCTTCCGCGGTCGCGAAGCCATCAGCC AGCCCTTTCGCTTCGACCTGGAGCTGGTCAGCGAGCGATCCGACCTGGACCTCGACGCGCTGCTGCACCAGCCGGCCTTCCTGATCCTCTCGCCGAGCGG GCAAGGGGTCCACGGACAGCTCACCAGCATCGCCCAGGGGGACTCCGGCAAGCGCCTGACCGGCTATCGCGCGACCCTGGAGCCGCGCCTGGCCTACCTG GGGCTGTGCAGCGACCAACGCATCTTCCAGCGCCTCAGCGTGCCGGAAATCATCGGCCGGGTGCTGGAGGGCCACGGCATTCTCGCCGACGCCTATCGCT TCCAGCTGGGCCCGACGCCGTACCCGGCCCGCGAATACTGCACGCAGTACGACGAAACCGACCTGGCGTTCCTCAGCAGGCTCTGCGAGGAGGAGGGCAT CCATTACCACCATGAGTTTTCTGCCCAGGGCCATATGCTGGTCTTCGGCGACGACCAGACCTCCTTTCCGCGGCTGCAACGCCCCGTCGCCTACGTGCAG GACGCCGGGCTGGTTGCCGACCAGCCGGTGGTCAAGCGCTTCGGCGTGCGCTTCGACACCCGTGCCAGCCGGGTTACCCGGCGCGACTACGACTTCGAGC AACCCGCGTTGCAGATGCAGGCCGCCCATGGCCCGCAGCTCGGGGCGCAGCAACCGGACCTGGAGGACTACGACTATCCTGGCCGCTTCACCCACCGCGA GCGCGGCAAGCACCTGAGCCGGCGCGCGCTGGAACGGCATCGCGCCGACTACCTACAGGCCAGGGGCGAAAGCGACGAACCGGCGCTGCTCAGCGGACAC TTCCTGACGCTGTCCGCGCATCCTCGCGGCGAATGGAACGATCTCTGGCTGCTTACCGAGGTTCTCCACGAAGGGCGGCAGCCGCAGGTACTGGAAGAGT CGATCGACAGCGACGTCGCGCAGGGCCGGGGCGATTTCCGCCAGGGCTATCGCAACCGTTTCGTCGCCACTCCCTGGAGCGCGCATTTCCGCCCCCCGCT GGAGCATCCCAGGCCACGCGTGCTGGGCTGCCAGACAGCGGTCGTGACCGGCCCCGCCGGCGAGACCATCCACTGCGACCAATACGGCCGGGTCAAGGTG CAGTTCTTCTGGGATCGCCTCGGCCAGGCCGACGACAACACCAGTTGCTGGTTGCGCGTCGCCTCCAACTGGGCGGGCAAGCGCTATGGCGGCGTCGCCA TCCCGCGGGTGGGCATGGAAGTCCTGGTGGGTTTCCTGGAGGGCGATCCGGATCAGCCGCTGGTCACCGGCTGCCTCTACCACAGCGAAAACCGGGTGCC CTACGAGCTGCCGCAGAACAAGACCCGCAGCGTTTTCAAGACCGACAGCTACCCCGGCGGCGGCGGTTTCAACGAACTGCGCATCGAGGACCGCAAGGGC CAGGAACAGATCTTCGTCCACGCCCAGCGCGACTGGGACGAGAACATCGAGCACGACCAGAAGATCCGCGTCGGCCACGAGCGCCACGACACGGTCGAGG GCGATAGCTACAGCGAGTTCAGGGCCGAGGAACAGCGCACGGTCCACGCCGACCGCAAGGTCGAACTGAAGGCGGCCGACCACCTCAGCGTCGCCGACGC GTTGCACCTGAGGATCGGCACCGGCCAGTTCGTCGAGGCGGGCGACGAGATCCATTTCAAGGCCGGCGACAAGGTAGTGATCGAGGCAGGCATGGAGCTG ACCCTAAAGGGCGGTGGCAGCTTCGCCAGGCTCGACCCGGGCGGCGTCACCCTCGATGGCGCCCAGGTGATGATCAACAGCGGCGGCAGCCCCGGCATCG GTAGCGGCGTTCGCGCGCTGTCGCCGCTGCAACCGCTCGCGGCCGACGCCGCGGCGGCGGGAGGCGCCTTGTTGGGAGCCATCGCTCAGAAGGTCGGCGA AGCGCCGCAGAAACTCCTGCGTTTCGAACTCAGTCCGTTGCCCGGCGTGGCATCGGCGGCCAGGCAACCGTATCGGCTCTACGCCAATGGTGCCTTCAAG GAGGAGGGCATCGCCGACGAAGGCGGCGCAATCAGCTTCGAACCGCTGCCGGGCGAACGCACCTATCGTATCGAGACCGCCAATGGCCACGCCTACGAAG TGGAGATGGTCGACCGGCCGGACGCACTGCAGGCCGACGATCGGCTCGCCCAGCAGGGGTTCCGCGACTACCGGGCGGAAATGCCCCAGCACAAGCCGCG TTCCGCACCGGACGCCTACCGGCGCGACGCCTCGCGGCCCGGCGCCGCCGACAAGGATGACCCCACGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGACCTGTACAAACCGCAGACCCTCAAGCTATACGCGCAACAGGCCGGCAGCGTCCGGCTGACCCTCGACTGGTTCGCCAACAAGGCCTTCTACCCGCC GCGCGCGGGTGTGCACATCAAGCCGCTGATCAATGGCCAGGCGGCCTTCGACGCGGTGCATGCGGCGATGGAAGCGGCCCGGCAGAGCATCGACATCATC ACCTGGGGCTTCGACCCGGCCATGCGCTTCAAACGCCCCGACGGACCGCGAATCGGCGAATTGCTGCAGACGAAGGGCCGCGAAGGAGTGCAGGCGCGGG TGCTGGTCTGGAGCAACCAGATCGCCAGGCTCAAGGAAAACACCATCCCCGGGGCCGGCGTCGGCGGTTCCGGCGGCACCTGGGCGGGCTCGGGCGTCGC CAGCGGCAGCGCGGTGGACAACGAGGTGCTGCGGCTGGAGCAGCGGCGCCAGCATAACCTCAACCTCATCGCGCGGCAGAAGGAAGCCCTGGAGCGCTCG
Amino Acid Sequence
>type IV secretion protein Rhs
MFAPANQTHFSLRIENLRHDFQVLAFRGREAISQPFRFDLELVSERSDLDLDALLHQPAFLILSPSGQGVHGQLTSIAQGDSGKRLTGYRATLEPRLAYL GLCSDQRIFQRLSVPEIIGRVLEGHGILADAYRFQLGPTPYPAREYCTQYDETDLAFLSRLCEEEGIHYHHEFSAQGHMLVFGDDQTSFPRLQRPVAYVQ DAGLVADQPVVKRFGVRFDTRASRVTRRDYDFEQPALQMQAAHGPQLGAQQPDLEDYDYPGRFTHRERGKHLSRRALERHRADYLQARGESDEPALLSGH FLTLSAHPRGEWNDLWLLTEVLHEGRQPQVLEESIDSDVAQGRGDFRQGYRNRFVATPWSAHFRPPLEHPRPRVLGCQTAVVTGPAGETIHCDQYGRVKV QFFWDRLGQADDNTSCWLRVASNWAGKRYGGVAIPRVGMEVLVGFLEGDPDQPLVTGCLYHSENRVPYELPQNKTRSVFKTDSYPGGGGFNELRIEDRKG QEQIFVHAQRDWDENIEHDQKIRVGHERHDTVEGDSYSEFRAEEQRTVHADRKVELKAADHLSVADALHLRIGTGQFVEAGDEIHFKAGDKVVIEAGMEL TLKGGGSFARLDPGGVTLDGAQVMINSGGSPGIGSGVRALSPLQPLAADAAAAGGALLGAIAQKVGEAPQKLLRFELSPLPGVASAARQPYRLYANGAFK EEGIADEGGAISFEPLPGERTYRIETANGHAYEVEMVDRPDALQADDRLAQQGFRDYRAEMPQHKPRSAPDAYRRDASRPGAADKDDPTP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site