Strain | Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTTCCGCGCCAGCTCGCCCTCGGCGCGCGACACCGCAGCCTTCAGCGGTGCCGGATCGATCTGGAACAGCAGATCGCCAGCCTTGACGTCGGCGCCCTC CTCGAAGCGCTTCTGCACGACGATGCCGGCCACCCGCGCGCGCACCTCGGCGACCCGCACCGGTTCGATCCGCCCAGGCAGTTCCGAACTCAGCGCCAGG GGCTCGGCCTGCACCGTCAGGACCTCCACCGGCAACACCATTTCGGCGGCCTCCTGTCGCTCTTCCGCCGGCCCACAACCTGCCAACGCGATGGCCATAG CCAACGCCCCGATCCTTCCTATTGCACGCAAATCAGCCATGACACACCCGACCGTTGATTGAAAACGGATCGAATGGTACTTTTTCGAGCTAATTGAGTC AATATTGTCTCAAATGATCTTTTGACAGCTAATTCCTTTGGACGCGAGGCCAGTTTTCTGCACAATGCGCACAATCAGAAAAACCAACCGGGACCCATCG
|
|
DNA Sequence for Gene |
>NQ52_RS01510
ATGACCCTGATTTCCCATGACGAGCGACTCATCAAGGCGCTGGCAGTCGCCATCGTCGACCACCCGCGAGCGACGCTGAAAGAACTGGCCGAGGCGGCCG GCGTAAGCAAGGCCACCCTGCACCGCTTCTGCGGCACGCGGGACAACCTGGTGCAGATGCTCGAGGGCCACGGAGAGACCGTACTGAACCAGATCATCCA GGCCTGCGACCTGGAGCATGCCGAGCCTCTGGAGGCGTTGCAGCGCCTGATCAAGGAACACCTCACCCACCGCGAGCTGCTGGTATTCCTGGTATTCCAG TACCGCCCGGACTTCCTCGACCCGCACGGCGAAGGCGCACGCTGGCAGTCCTACCTGGAAGCGCTGGACGCCTTCTTCCTGCGCGGACAGCAGAAAGGCG TGTTTCGCATCGACATCACGGCAGCCGTGTTCACCGAACTGTTCATCACCCTGGTCTACGGCATGGTCGATGCGGAACGTCGCGGACGGGCGGCCAGCTC CAATTCCGCGCATACCCTGGAGCAGATGTTCCTCCACGGCGCCTCCAATCCGGCGCGCTCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCTCACGCCCGCGGCGGCGCCCCTCTCGTCGCCGCATGGCACGGTCCGATCCGCATGCCGTCGACTTCGGCCGCCCGGAGGCCTGCTCGACACACGGGA AGATCAGTCGTCACGGGCCCTGCGACAAAGTGCCTCGACAGCCGGAAAGGACCGTGACGCTCGTCGGCGATACTGGCACTTGGCCTTGCTTCCGGGCATC CTAACTGTCTACCGAATCACACCTCCCCCAGGAATTCCGGTCAGTGTCGACCCCCTCGCTAACCCCGTCGCCGCCTCCCGCCGGCGACCCACTGACCGTA CCCGACCGACCGGCAGCCAAGGCTGGCCTGCTGTTGCTGGTCCTGTTGATGCTCGGCCTGCTGCTCTGGCAGATGAGCCAGGAGCTGCGCCAGCAGGAAC GCTTCGAACACGAGCGGGCCGCGGCCCAGCTCGATCGTCTCAACGACCGCCTGTCCCTGACCCTCGAACTCAAGGCGCGCACCGCCCTCGCCCTGCTCCC
|
|
Amino Acid Sequence |
>transcriptional regulator
MTLISHDERLIKALAVAIVDHPRATLKELAEAAGVSKATLHRFCGTRDNLVQMLEGHGETVLNQIIQACDLEHAEPLEALQRLIKEHLTHRELLVFLVFQ YRPDFLDPHGEGARWQSYLEALDAFFLRGQQKGVFRIDITAAVFTELFITLVYGMVDAERRGRAASSNSAHTLEQMFLHGASNPARS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|