Pseudomonas aeruginosa AZPAE14373, NQ52_RS01500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCACCTTGGCCGCCGGCGACAGCCAGGCGCTGACCCTGCGCGTCGAAGGGACGCCCTACGAGCGCCAGGGCGCGTTGCAGTTCGCCGACGTGGCGGTGGA TCGCGGCACCGGCCAGATCGCCCTGCGCGGCAAGTTCGCCAACCCCGACGGGGTCCTGCTGCCGGGCATGTACGTGCGCGTACGTACGCCCCAGGGCATC GACAACCAGGCGATCCTGGTGCCGCAACGGGCCGTGCGCCGCTCTAGCGACGGCAGCGCCCAGGTGATGGTGGTGGGCGCCGACGAGCGCGCCGAGGCGC GCAGCGTCGGTACCGGCGTCATGCAGGGGTCGCGCTGGCAGATCACCGAGGGCCTGGAGCCGGGTGACCGGGTCATAGTCGGCGGCCTGGCTGCGGTGCA GCCGGGGGTGAAGGTCGTGCCGAAGCCGGATGGTGCCCAGGTGCAAGCCCAGTCGTCCGTGCCGCAACAGTAAGGGCGGGTTCGCCCCGAGGATTTTCCG
DNA Sequence for Gene
>NQ52_RS01500
ATGTCCGAATTCTTCATCAAGCGGCCGAACTTCGCCTGGGTGGTGGCCCTGTTCATCTCCCTGGCCGGCCTGCTGGTCATTTCCAAATTGCCGGTAGCGC AGTACCCCAATGTCGCGCCGCCACAGATCACCATCACCGCCACCTATCCCGGCGCCTCGGCGAAGGTGCTGGTGGACTCCGTCACCAGTGTGCTCGAGGA GTCGCTGAACGGCGCCAAGGGCCTGCTCTACTTCGAGTCGACCAACAACTCCAACGGCAGCGCCGAGATCGTCGTCACCTTCGAGCCGGGCACCGATCCG GACCTGGCCCAGGTGGACGTGCAGAACCGCCTGAAGAAAGCCGAGGCGCGCATGCCGCAGGCGGTGCTGACCCAGGGCCTGCAGGTCGAGCAGACCAGCG CCGGTTTCCTGCTGATCTATGCGCTCAGCTACAAGGAAGGCGCTCAGCGCAGCGACACCACCACCCTCGGCGACTATGCCGCGCGCAATATCAACAACGA GCTGCGGCGCCTGCCGGGCGTCGGCAAGCTGCAATTCTTCTCTTCCGAGGCGGCCATGCGGGTCTGGATCGATCCGCAGAAGCTGGTGGGCTTCGGCCTC TCCATCGACGACGTGAGCAATGCCATCCGCGGGCAGAACGTGCAGGTGCCGGCCGGCGCCTTCGGCAGCGCGCCGGGCAGTTCCGCGCAGGAGCTGACGG CGACCCTGGCGGTGAAGGGCACCCTGGACGATCCGCAGGAGTTCGGCCAGGTGGTGCTGCGCGCCAACCAGGACGGCTCGCTGGTCCGGCTCGCCGATGT CGCGCGCCTGGAACTCGGCAAGGAGAGCTACAACATCTCCTCGCGGCTGAACGGCACGCCCACCGTGGGCGGGGCGATCCAGCTGTCGCCCGGGGCCAAC GCGATCCAGACCGCTACCCTGGTGAAACAGCGTCTCGCCGAACTGTCGGCGTTCTTCCCCGAGGACATGCAGTACAGCGTGCCCTACGACACCTCGCGCT TCGTCGACGTGGCCATCGAGAAGGTGATCCACACCCTGATCGAAGCGATGGTGCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAGAACGTCCGCTACAC CCTGATCCCGTCCATCGTGGTGCCGGTGTGCCTGCTGGGTACGCTGATGGTGATGTACCTGCTGGGGTTCTCGGTGAACATGATGACCATGTTCGGCATG GTCCTGGCGATCGGCATCCTGGTGGACGACGCCATCGTGGTGGTGGAGAACGTCGAGCGGATCATGGCGGAGGAGGGGATTTCCCCGGCCGAGGCCACGG CCAAGGCGATGAAGCAGGTGTCCGGCGCCATCGTCGGCATCACCCTGGTGCTCTCGGCGGTGTTCCTGCCGCTGGCTTTCATGGCCGGTTCGGTGGGGGT GATCTACCAGCAGTTCTCGGTGTCGCTGGCGGTCTCGATCCTATTCTCCGGCTTCCTCGCCCTGACCTTCACCCCGGCGCTGTGCGCCACGCTGCTCAAG CCCATTCCCGAAGGGCACCACGAGAAGCGCGGCTTCTTCGGCGCCTTCAACCGTGGCTTCGCCCGCGTCACCGAGCGCTATTCGCTGCTCAACTCGAAGC TGGTGGCGCGCGCCGGACGCTTCATGCTGGTGTACGCCGGCCTGGTGGCCATGCTTGGCTACTTCTACCTGCGCCTGCCGGAAGCCTTCGTGCCGGCGGA AGACCTCGGCTACATGGTGGTCGACGTGCAACTGCCGCCTGGCGCTTCGCGCGTGCGCACCGATGCCACCGGCGAGGAACTCGAGCGCTTCCTCAAGTCC CGCGAGGCGGTGGCTTCGGTGTTCCTGATCTCGGGCTTCAGCTTCTCCGGCCAGGGCGACAATGCCGCGCTGGCCTTCCCGACCTTCAAGGACTGGTCCG AGCGAGGCGCCGAGCAGTCGGCCGCCGCCGAGATCGCCGCGCTGAACGAGCATTTCGCGCTGCCCGACGACGGCACCATCATGGCCGTGTCGCCGCCACC GATCGACGGCCTGGGCAACTCCGGCGGTTTCGCCCTACGCCTGATGGACCGCGGTGGCGTCGGCCGCGAGGCCTTGTTGCAGGCCCGCGATACCTTGCTC GGCGAGGTCCAGACCAACCCGAAATTCCTCTACGCGATGATGGAAGGCCTGGCCGAAGCGCCGCAACTGCGCCTGTTGATCGACCGGGAGAAGGCCCGCG CCCTGGGGGTGAGCTTCGAGACCATCAGCGGCACGCTGTCCGCCGCCTTCGGCTCGGAGGTGATCAACGACTTCACCAATGCGGGGCGCCAACAGCGGGT GGTGATCCAGGCCGAACAGGGCAACCGGATGACCCCGGAAAGCGTGCTCGAGCTATACGTGCCTAACGCTGCTGGCAACCTGGTACCGCTCAGCGCCTTC GTCAGCGTGAAATGGGAAGAGGGACCGGTGCAATTGGTGCGCTACAACGGCTACCCGTCGATCCGCATCGTCGGTGACGCCGCGCCCGGCTTCAGCACCG GCGAAGCCATGGCGGAAATGGAGCGCCTGGCCGCGCAACTGCCGGCTGGCATCGGCTACGAGTGGACCGGCCTGTCCTATCAGGAGAAGGTCTCCGCCGG GCAGGCCACCAGCCTGTTCGCCCTCGCCATCCTGGTGGTCTTCCTGTTGCTGGTGGCGCTCTACGAGAGCTGGTCGATCCCGCTGTCGGTGATGCTGATC GTGCCGATCGGCGCCATCGGCGCGGTGCTCGCGGTAATGGTCGCGGGTATGTCCAACGACGTGTATTTCAAGGTCGGCCTGATCACCATCATCGGCCTTT CGGCGAAGAACGCGATCCTCATCGTCGAGTTCGCCAAGGAACTCTGGGAGCAGGGGCATAGCCTGCGCGACGCCGCCATCGAGGCCGCGCGCCTGCGCTT CCGACCGATCATCATGACTTCCATGGCGTTCATCCTCGGCGTGGTACCCCTGGCCCTGGCCAGCGGCGCCGGCGCGGCGAGCCAGCGCGCCATCGGCACC GGAGTGATCGGCGGGATGCTCAGCGCCACCTTCCTCGGCGTGCTGTTCGTACCCATCTGTTTCGTCTGGCTGCTGTCGCTGTTGCGCAGCAGGCCGGCGC CCATCGAACAGGCCGCTACGGCCGGGGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGAGATGCGCAAACCTGCATTTGGCGTATCGGCGTTGCTGATCGCCCTGACCCTCGGCGCCTGCTCCATGGCGCCGACCTACGAACGTCCCGCCGCGCC GGTGGCCGACAGCTGGAGCGGCGCCGCCGCCCAGCGCCAGGGCGCGGCGATCGACACGCTGGACTGGAAGAGTTTCATCGTCGATGCCGAACTACGCCGC CTGGTGGGCGTGGCCCTGGATAACAACCGCTCGCTGCGCCAGACCCTCCTGGATATCGAGGCGGCCCGCGCGCAGTACCGCATCCAGCGCGCCGACCGGG TTCCGGGCCTGAACGCCGCTGCCACCGGCAACCGCCAGCGGCAGCCGGCCGACCTGTCCGCCGGCAATCGCTCGGAAGTGGCCAGCAGCTACCAGGTCGG GCTGGCCCTGCCGGAGTACGAACTGGACCTCTTCGGTCGGGTCAAGAGCCTGACCGACGCAGCCCTGCAACAGTACCTGGCCAGCGAGGAGGCGGCGCGC
Amino Acid Sequence
>multidrug efflux RND transporter MexD
MSEFFIKRPNFAWVVALFISLAGLLVISKLPVAQYPNVAPPQITITATYPGASAKVLVDSVTSVLEESLNGAKGLLYFESTNNSNGSAEIVVTFEPGTDP DLAQVDVQNRLKKAEARMPQAVLTQGLQVEQTSAGFLLIYALSYKEGAQRSDTTTLGDYAARNINNELRRLPGVGKLQFFSSEAAMRVWIDPQKLVGFGL SIDDVSNAIRGQNVQVPAGAFGSAPGSSAQELTATLAVKGTLDDPQEFGQVVLRANQDGSLVRLADVARLELGKESYNISSRLNGTPTVGGAIQLSPGAN AIQTATLVKQRLAELSAFFPEDMQYSVPYDTSRFVDVAIEKVIHTLIEAMVLVFLVMFLFLQNVRYTLIPSIVVPVCLLGTLMVMYLLGFSVNMMTMFGM VLAIGILVDDAIVVVENVERIMAEEGISPAEATAKAMKQVSGAIVGITLVLSAVFLPLAFMAGSVGVIYQQFSVSLAVSILFSGFLALTFTPALCATLLK PIPEGHHEKRGFFGAFNRGFARVTERYSLLNSKLVARAGRFMLVYAGLVAMLGYFYLRLPEAFVPAEDLGYMVVDVQLPPGASRVRTDATGEELERFLKS REAVASVFLISGFSFSGQGDNAALAFPTFKDWSERGAEQSAAAEIAALNEHFALPDDGTIMAVSPPPIDGLGNSGGFALRLMDRGGVGREALLQARDTLL GEVQTNPKFLYAMMEGLAEAPQLRLLIDREKARALGVSFETISGTLSAAFGSEVINDFTNAGRQQRVVIQAEQGNRMTPESVLELYVPNAAGNLVPLSAF VSVKWEEGPVQLVRYNGYPSIRIVGDAAPGFSTGEAMAEMERLAAQLPAGIGYEWTGLSYQEKVSAGQATSLFALAILVVFLLLVALYESWSIPLSVMLI VPIGAIGAVLAVMVAGMSNDVYFKVGLITIIGLSAKNAILIVEFAKELWEQGHSLRDAAIEAARLRFRPIIMTSMAFILGVVPLALASGAGAASQRAIGT GVIGGMLSATFLGVLFVPICFVWLLSLLRSRPAPIEQAATAGE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site