Pseudomonas entomophila L48, PSEEN1868 (clpP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCCCGAAAGCCCTGCTGGAAAACGAAGTCAACCGTCTGCGCGTGCAGGCTGTTCAGCAGTTCGGTGGCAACATCAAGCCTGAGCAGCTGCCGGCCGAACT GTTCGAAGAGCAAGCCAAGCGCCGCGTCGTGCTGGGCCTGATCGTCGCCGAAGTGGTCAAGCAGTTCGAGCTGAAGCCTGATGAAGCAGAAGTTCGCAAG GTGATCGAGGAAATGGCCTCGGCTTATCAAGAGCCTGAGCAGGTCGTTGCCTGGTACTACAAGAACGACCAGCAACTGAACGAAGTCCGTTCGGTTGTAC TGGAAGAACAAGTTGTAGATACTGTCCTGCAGAAAGCGACTGTGACCGACAAATCGGTCTCGTACGAAGAAGCTGTCAAGCCAGCACAGGCACCTGCCGC CGCTGAGTGATAAGGCTTCTCTCGTAGGAACCCCACAAGCCAGCCTTCGCGCTGGCTTGTGCGTATTCAAGCCATGACTATTTGGGAGTGAGTGCAGGAC
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| DNA Sequence for Gene |
>PSEEN1868
|clpP
ATGTCCCGCAATTCTTATATTCAGCAGAGCTCTGACATCCAGGCCGCAGGCGGCCTGGTCCCGATGGTTATCGAGCAGTCCGCCCGTGGCGAACGCGCCT ATGACATCTACTCGCGCCTTCTGAAGGAGCGGGTGATCTTCCTGGTCGGCCCCGTAGAAGACTACATGGCCAACCTGGTGGTGGCGCAACTGCTGTTCCT TGAGGCGGAAAACCCGGACAAGGATATCCATCTGTACATCAACTCGCCGGGCGGCTCGGTGACTGCCGGCATGTCGATCTACGACACCATGCAGTTCATC AAGCCGGACGTCTCGACCATCTGCATCGGCCAGGCCTGCAGCATGGGCGCCTTCCTGCTGGCGGCCGGTGCCGCCGGCAAGCGCCACTGCCTGCCCAACT CGCGGGTGATGATTCACCAGCCGCTGGGTGGCTTCCAGGGCCAGGCGACCGACATCGAGATCCACGCCCAGGAAATCCTCAACATCAAGGCGCGCCTGAA CGAGCTGCTGGCCCACCACACTGGCCAGTCGCTGGAAACCATCAAGCGCGACACCGAGCGTGACAACTTCATGAGCGCTGCGCGCGCGGCCGAGTACGGC CTGATCGACTCGGTCTACGACAAGCGGCAACTGGCATCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCAATGCGCCAGAGCGGGCGGGCACGGATTGTGCCCGCCCGCGGACTTGAAAAAGCCAGCGATTGCCTTCATCTTGTGTTTCAAGCCTACCGGATTGGA TCGATCGAATGACTGACACCCGTAATGGCGAGGACAACGGCAAATTGCTCTATTGCTCCTTCTGCGGCAAAAGCCAGCACGAAGTACGCAAGTTGATTGC CGGCCCCTCGGTATTTATCTGCGACGAGTGCGTCGACCTGTGCAACGACATCATCCGTGAGGAGGTGCAGGAAGCCCAGGCCGAGAGCAACGCGCATAAA TTACCCTCGCCGAAAGAAATCAGCGGCATCCTGGACCAGTACGTCATTGGTCAGGAGCGCGCGAAAAAGGTCCTGGCCGTAGCGGTATACAACCACTACA AGCGCCTGAACCAACGTGACAAAAAGGGCGACGAAGTCGAACTGGGTAAAAGCAACATCCTGCTGATCGGGCCGACCGGCTCGGGCAAAACGTTGCTTGC
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| Amino Acid Sequence |
>ATP-dependent Clp protease proteolytic subunit
MSRNSYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFI KPDVSTICIGQACSMGAFLLAAGAAGKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAHHTGQSLETIKRDTERDNFMSAARAAEYG LIDSVYDKRQLAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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