Pseudomonas entomophila L48, PSEEN1307
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAGCAACAACAACTGCCGGCGGTCATTGCCCTGATCGACATCGACCACTTCAAGACCATCAACGATACCTACGGCCATGTAGTCGGCGACTGCGTGTT GCGCCAACTCAGCCAGGAGCTCAAGCGCAGCCTGCGCGAGGATGACCTGGCCGGGCGCTACGGTGGCGACGAGTTCTGCGTGATTCTCCCTGGCACACAG GAAGCCCATGCCTGCCAGGCCATGGAGCGCCTGCGCGAGCGCGTGGGCGACTATCGAAACCCGCAGCTGCCGGACCTGCGCATCAGCCTCAGCATCGGCC TGGCGGCATTCCAGCCAGGCCTGCCGACTCCGGAGCACTGGCTGGCCGAGGCCGATCGGGCGCTCTATGCGGCCAAGCACCAGGGGCGCGACCAGGTCAA TTTCGCCCGCGGCGGCGTCACAGCGCTCAGGCTGGCCTATCCTGAGTGAAGCTTCCCCCAGGCTCGGGCGGAAGACGGCTGTCGAAGGAGTCGCCCGTAC
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| DNA Sequence for Gene |
>PSEEN1307
ATGGACAGGAACGTCGACCTTTCACCTTCCACCCCCACCTCACGCCTGCAGATGCGTCGGCTGGTCGGCGGCTTCTGCGCCGTGTTCGGCCTGGCCTGCC TGATCGCCCTCGGTGCCTTGTTCAACATCGCCGCCACCCTCGACCGGCAGGAGCGCGACCGCAGCACCTTCCACGCCACCCAGGCGCTGGAGCAACGGCT GCTGGCCTCGCGTCAGTTTCTTTCCAGCTATGCCGTCTGGGACGTCGCCTACGAGCATCTGGTTGGCAAGGTCGACTGGCAATGGGCCTATGACGAGAAG AACGTCGGCGAATCGCTGTACAGCGCCAGCGGCTACGAGGGTGTATTCGTGGTCGAGGACGAGCGCACCAGCTACGCGCTGTTCAAAGGCAAGCCCAGCC ACTCCCCCGCCAGCGCCTATGTGGACACCGCGTTGGCGCCATTGATCGACGAAGCGCGCAAGGCCGCCCCGGCACGCGAGCAAGTCACCCATTTCATTCG CTTCAATGGCTGGCCGGCGGTGCTCAGCGCCGCGGCGATAAGGCCCGACAAGGAAGTGACCGAAAGCGAGGTCAGCCAGGCACCGGTGATGCTGTTCATC GACCAGTTGACCGAAGCGAAGCTCGCCCGCCTGGGCGAAGGCGCAGGGCTGGCCAGGATGCGCCTGGAGAAAAACGTCGCCGAAGCGCCCGAACAACCCC ATATCGACCTGGGTGATACCGGCTACCACCTGGCCTGGGACAGCCCCGAGCCCGGCCGCCAGTTGTTATGGGCAGTACTTCCGCCTTTGCTGGGTGTGCT GCTGATCATGGGCTTGGTGCTGGCCTACCTGTTCCGCCACGCCCTACGCAGTTCCCAGGCCATCGACCAAAGCCTGCTGCGCCTGCAGCAGAGCAACCAG GCCCTGGAGGCCAGCGAGCAGCGTTTTCGGGCCGTGGCCGAGGCAGCGTCCGACTGGATCTGGGAGACCGACCGGCACCATCGATTGACCTACCTGTCGC AACGTTTCGTCAAGGTCACCGGCTACCCGGTCGAGCACTGGCTGGGGCAGCCACTCAACCAGTTGCTGGCCTGTGACACCACGCCCTTGCTGCCCTGGCT GGACAGCCAGGCCGACAGCGACGCGCAACAACTGGCCAACCTGCGCTGCAACTACGACGATGCCACCGGGCAGAACCGCTATTGCCGCGTCTCGGCGCGT TCGATCGTGTTCGACGGCAAACTCGCCGGGTTCCGCGGCACGGCCAGCGACATCACCGACGAGGTCGCCGCCCATGCCCGCATCCAGCACCTGTCGATGC ACGATGCCCTGACGGGCCTTGCCAACCGCAACAAACTGTCGCGTCACCTCGAACAAGCGTTGCTTCGCGGCAGCGACTCGCCGCCCCTGACCTTGCTGCT GCTCGACCTGGACAGCTTCAAGCCGATCAACGACTCCCTCGGCCACCCCGCTGGCGACGCGGTGCTGCAGGAAGTCGCCAATCGCCTGCGCGACACCACC CGTGACGATGACCTGGTCGCCCGCCTGGGCGGCGACGAATTCGTACTGGTGCTGCATGGCGTGGACACCCGCAGCGAAATCGACCGTTTCTGCGCCCGCC TGCTCGACCTGCTGCAGCAACCGATCAGCTACGAGGCGCATCAATTGCATATCGGCGCCAGCATCGGCGTAGCCCAGACCCGGGTCCAGGGCTACGATGC CGGCGAACTGATCCGCTGCGCCGACATCGCCCTCTACCAGGCCAAGGCCGACGGCAAGAACACCTGGCGCTACTTCTCGCCGGAGATGAACCAGCAGATC CAGTACCGTCGCCAGCTGGAAAACGACCTGCGCCGGGCCATCAAACAGCACGAGTTCGTTTTGCACTATCAACCGCGCTATCGCCTGGACGACCTGCACA TCGTCTCGGTCGAGGCCCTGCTGCGCTGGCAACACCCCCAGGAGGGCCTGCTGGGGCCGGACACGTTCATCCCGCTGGCCGAGCAGAGCGACCTGATCGT GCCCCTGGGTCGCTGGGTGCTGGCCGAAGCCTGCCGCGCTGCCCGCGACTGGCCCGAAGAGTTGCTGGTGTCGGTCAACCTGTCACCCGCGCAGTTCTCC CGCAGCGACGTGGTCGCCGATGTGCGCCAGGTGCTGCTGGAGACCGGCTTCCCGGCCCAGCGCCTGGAACTGGAGATCACCGAGAACGTCATGCTCAACG ATATCGAGGGCGCCCTGGGCACCATGCTCGCGCTCAAGGAACTGGGTGTGCGCCTGAACATGGATGATTTCGGTACCGGCTACTCGTCGCTGGGCTACCT GCGCACTTATCCGTTCGACAGCATCAAGATCGACAAACGCTTCATTGCCGGGCTGAGCAGCCAGAGCGGTAACGACAAGGCGGTGGTTCAGGCCATCATC AGCCTCGGCCAGGCCATGGGCCTGACCGTCACCGCCGAGGGGGTGGAGACCGAGCAGCAGCTCCAGGCGCTGGGCAAGGAGAACTGCCACGAGGTGCAGG GCTACTACCTGAGCAAGCCGGTAGACCGGGAAGGCTTCGAGGCCTTGCTGTCGGCGCGGGATGTACGCCAAGGCGTTTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCACCGACACCTATCGGGTGATGGGGCTGCGCTCGGCGACGATTTCCGGCAGGTCGGTACGCCGCAGGTAGAGGCGCAGGGGCTCGCCGATGTTCAGGC GGTCGTCGACATGCTGGCCGAACAGCAGCGCCAGGCGCTCGCGGCACAGTGCCATACGCCGATCGCCTTCGGCGCGCCAGACGAACTCGCTGCAGGGGGT AATGCTGTCGTCGGCCACATCCATGCCGAACGAATCTTCGGAAAAGCGCACGATATGGGTGCCGCGCTTGCCGTGGAAACCGACGAAACCCTTGAGCTGG TCGGCGGCGTTGCAGATGTCCTGGGACGTGATGGCCATGACGTAACCTCGCAAAAAGTTCGGAAGTGACGCACGCCGGGCTGGGGCGGTCGCCTCTGGTG GGCTACGCGCAGGTGCCAGCCTAACGCAACTGCGAGACTGTTCGCCAAGGTTTTTCATTCGCCTTTCACAAGCCCGCTAGACTGGTTCATGACCCCTTTT
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| Amino Acid Sequence |
>sensory box-containing diguanylate cyclase
MDRNVDLSPSTPTSRLQMRRLVGGFCAVFGLACLIALGALFNIAATLDRQERDRSTFHATQALEQRLLASRQFLSSYAVWDVAYEHLVGKVDWQWAYDEK NVGESLYSASGYEGVFVVEDERTSYALFKGKPSHSPASAYVDTALAPLIDEARKAAPAREQVTHFIRFNGWPAVLSAAAIRPDKEVTESEVSQAPVMLFI DQLTEAKLARLGEGAGLARMRLEKNVAEAPEQPHIDLGDTGYHLAWDSPEPGRQLLWAVLPPLLGVLLIMGLVLAYLFRHALRSSQAIDQSLLRLQQSNQ ALEASEQRFRAVAEAASDWIWETDRHHRLTYLSQRFVKVTGYPVEHWLGQPLNQLLACDTTPLLPWLDSQADSDAQQLANLRCNYDDATGQNRYCRVSAR SIVFDGKLAGFRGTASDITDEVAAHARIQHLSMHDALTGLANRNKLSRHLEQALLRGSDSPPLTLLLLDLDSFKPINDSLGHPAGDAVLQEVANRLRDTT RDDDLVARLGGDEFVLVLHGVDTRSEIDRFCARLLDLLQQPISYEAHQLHIGASIGVAQTRVQGYDAGELIRCADIALYQAKADGKNTWRYFSPEMNQQI QYRRQLENDLRRAIKQHEFVLHYQPRYRLDDLHIVSVEALLRWQHPQEGLLGPDTFIPLAEQSDLIVPLGRWVLAEACRAARDWPEELLVSVNLSPAQFS RSDVVADVRQVLLETGFPAQRLELEITENVMLNDIEGALGTMLALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFIAGLSSQSGNDKAVVQAII SLGQAMGLTVTAEGVETEQQLQALGKENCHEVQGYYLSKPVDREGFEALLSARDVRQGVS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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