Pseudomonas aeruginosa AZPAE14395, NQ58_RS14425

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCCAGATGATCACCTGGCCCAGCCGCGAATCGGCGTATTCCTCCAGCCAGCGAGCCTGGGCGCGCTGGCCGATGTCGGCGGGATACAGGCTCGGCTGCG GGTAGCGCTCCTCCAGGTACTGGCAGATCACGCTGGAATCGTTGAGGACGAAGTCGCCGTCCACCAGCACCGGAATCTGGCGCAACGGACTGAGGCGCTC GAAGGCCTCGTCGCCGAAGAACGGCACGATGGGGTCGATGCGGTAGGCGATGCCTTTCAGCTCCAGCAGCACCAGCACCTTGCGCACATAGGGGGACAGA TAGGAACCGATGATCAGCAAAGGTTCGGCCACGGCGAGACTCCTGTTCTTGTTATGGGAACGCCGATCCTCCGGCAAACCGGCGGGGCGACTCAAGTGGC TTCCCGACGGACGCCAATTGCAGGGATAGTCGCACTTTGCGATCATTTGCGAATAATTCTCGTTTTTCCATTCAATCCCGTTTCGGGATGGGGAGCGGCC
DNA Sequence for Gene
>NQ58_RS14425
GTGTCGGCGGGTGACGTCAGCAACAGCGAATTCGTGGGTAGCCTGTACCGGGACCACCGCGGCTGGCTGCTTGCCTGGCTGAACCGCAACCTCGGCTGCC GCCAGCGCGCCGAAGACCTCAGCCAGGACACCTTCGTTCGCCTCCTCGGCCGCCCGGAGCTGCCCGGCCTGCGCGAACCGCGCGCGTTCCTGGCGAAGGT GGCGCGCGGCCTGATGATCGACCACTTCCGCCGCGCCGCCCTTGAGCAGGCCTATCTCGCCGAACTGGCGCTGGTTCCGGAAGCGGAGCAGCCTTCGGCC GAAGAGCAGTACCTGATTCTCGAGGATCTCCGCGAGATTGATCGCCTGCTTGGCACGCTGTCGCTGAAGGCGCGCAGCGCGTTTCTCTATAGCCGCCTGG ACGGCATGCCCCACGCGGAGATCGCCGAGCGTCTCGGAGTCTCGGTGCCGCGCGTGCGCCAATACCTGGCCCAGGGCCTGCGCCAGTGCTATATCGCCCT CTACGGAGAGCCCCGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCCGACGATCGTCATTCGCCGGTACGCGCGCGGGTGCTCGACGAAGCCATCGCCTGGCAATTGCTGCTCGACTCCGGCGAAGCCCATCCCGACGATCA CCGCGCCTTCCACCGCTGGTACGCGGCGCATCCCGAACACGAACGCGCCTGGGAACAGCTCGGCGGCCTCGACCGGCACCTGGCGAGAGCCGCCAACGGG CCGGCACGCAACGCCCTGCTGTCCGGCAACGCACGCTTCAAGCGCCGCCTGCGCCGGCTCGGCGGCAGCGCCCTGGGGCTAGTGCTGGCGCTAGGCGTCG GGCTCGGCGTGGCCAACCGCTACGTCCCGGTCCGCTACCTGCTGGCCGATGCCTACAGCGCCACCGGCGAGCAGCGCGAGCTGACCCTTCCGGATGCCAC CCATGTGCGCCTGAACAGCCGCAGCGCCATCGACGTCCGCTTCGACGGCGAACGCCGCCAGGTCGTGCTACTGGCCGGCGAGATCCTGGTGGAAACCGCC
Amino Acid Sequence
>RNA polymerase sigma factor
MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREPRAFLAKVARGLMIDHFRRAALEQAYLAELALVPEAEQPSA EEQYLILEDLREIDRLLGTLSLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGLRQCYIALYGEPR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site