Strain | Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AATGCCTGACACGGGGCGCTGCGCATGGCGTGGCCCTACAGCGGATCCTCGAGCATTCCTCGATGACGATGCGGTATGCGCACCTAACGCCGGGGCACTT GGAATCGGCGATGCGCTTTTCTCCGATTACTCAGTCTGGCTACAAATTGACCACATGAGGATCTGTGATAATCTGTAGTGAAGTTAACGCTTAACGTTAA GGGTTAATGAATGATTCTGACCTTTCGCTGCGACGAGACTCGTCAGCTTTTTGAGACGGGTCTTTCGAGGCGGTGGGGAGCGATCCTCACAGTCGCTACG CGTAAGCTCGCAATGCTTCATGCGGCTACGGAGCTTCGAGACTTGCGCTCTCCACCTGGAAACCGGTTGGAGCCGTTGCAGGGAAAGCGGGCGGGCCAAC ATAGCATCAGGATCAATGACCAGTGGCGTGTCTGTTTCGTCTGGACGGATGCGGGTCCCGAAGAAGTCGAAATAGTTGATTACCACTGAGGAGGTGGACC
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DNA Sequence for Gene |
>NQ58_RS09530
ATGGCTACCAATGGTATGCGCCCCATCCATCCTGGGGAAATATTGCGCGATGAGTTTCTGATGGAGTTGGATATCTCTCCAGCTGCTCTAGCACGCGCTT TGAAAGTCTCCGCTCCGACAGTGAATGATATCGTTCGTGAGCAGCGTGGTATCTCCGCAGATATGGCGATTCGTCTGGGGCGTTACTTTGATACGTCCGC TCAGTTCTGGATGAATCTCCAGAGTGAGTATTCGTTAGCAACTGCTTATGCGGCGAATGGCGAGCAGATCGAACATGAGATTGAGCCGCTGCTTGCTCAG GGATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGTGACGTTGATCGTAGAGCCCCGCAGATGCGGGGCTTTTTTATGCGAACCGTAAATCGGTAAAGGGGGGCGTAGACGGTTTGTAGTCGGTTTGTAGTC TGCCGACCAAAACAAAAAGGGGTTAGCTTGCGCTAACCCCTTGAAAAATATGGTGGCTACACCGGGACTTGAACCTGGGACATCAGCATTATGAATGCTG CGCTCTAACCGACTGAGCTATGTAGCCGAGTGGCGCGCATTTTCCGTATCTCGGGCGGGGCTGTCAACCCCTGGGCCTAGATAATTTTCTGATCTTTCAA TCGTTTAGACGGAAGGGGTCGGATCGCCGGAGAGAGGCCGATGGGGAGGGGCAGGAACGAAAAGCCCCGGCGCTTGGCCGGGGCTTTCCTGGGACGGGAA GGGGATTACACGTTGAAGCGGAAATGCATCACGTCGCCGTCCTTGACGATGTAGTCCTTGCCTTCCAGGCGCCATTTACCGGCTTCCTTGGCGCCCTGTT
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Amino Acid Sequence |
>XRE family transcriptional regulator
MATNGMRPIHPGEILRDEFLMELDISPAALARALKVSAPTVNDIVREQRGISADMAIRLGRYFDTSAQFWMNLQSEYSLATAYAANGEQIEHEIEPLLAQ G
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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