Strain | Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGACCTGGTCATCCTCGATATCGGCATTCCCAGGCTGGACGGCCTCGAGGTCATCAGCCGCCTGATGGTGCTGGCGTTGCCCCTGAAGATACTCGTC CTGACCGGCCAGAGCGCCTCGCTCTTCGCCCTGCGCAGCATGCAGGCGGGCGCCGCCGGGTTCGTCTGCAAGCAGGGCGGACTGGCCGAACTGGTGACGG CGGTGAATGCGGTCGCCTCGGGATACAGCTATTTTCCCAGCTCGGCCATGCGTCCTGTGCAACAGGGCGCCTATTCCGACGATGTGGAATTGCTCGGACG CCTGTCCGACCGCGAAGTATCGGTATTGCAATATCTCAGCCAGGGTTATTCGAACAAGCAGATATCCGAGCAGATGTTTATCAGCAACAAGACCGTCAGC ACTTACAAGGCGCGCTTGTTGTTGAAGTTGAACGCCGGCTCGCTGGTGGATCTCATCGAGTTCGCCAAACGCAATACGCTTATCTAAGGGCCGGAACCGA
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DNA Sequence for Gene |
>NQ58_RS09210
ATGAAGTTCCAGAAACGCAGTGCGTGCATGCTCGGCCTGCTTCTCGTATTCGCCTGCATGGCGGGATATGCCGTTCCGGCGAGGGCGACGGCTGGCGAAT ATGCTTCCCTGCTCCAGATTCCCGCTCCGGATCGCCCGGAGGGCGCCGATGCGGTCGTCGAAGTGCCGCTACACCAGGCTGCCGACGGGCTGCGCTCGCC GTCCCCTTCCAGCCTGGTGCTCGGCCTGCTGGTGGCCTGCCTGGTCTGCGTCGGATGCCTGGGCTGGAATACTGTCCTTCAACTCAGGCTCAGGCGCTGG CAACGTACCGAAGCCGACCTGAGCGGCCGCCTGGCATTGAAGCAGGCGCTGGTCGACGGGATTCCCTACCCGGTGAGCATCCGCACGCTCGACGGTCGCC TGCTGGCCTGCAACCGCAATTACCTGGAAAGCCTGCGGATGACCCGTGAGCAGGCCCGCGGCACCCTGTTGACCGATTCCGACTGGGTCGAGGGCAGCAA GGCACGGCTCATGCACCAGCAGTGCCTGGCGGTGGCTCGGGGAGGAACGGCGAGCTTCACCGACATGGCGGTGCGCATCGGCGGGCAATTGCTGGAGATC CACCATTGGGTCACGCCCTACAGGGATCGCCAGGGCCGGGTGCTCGGCCTGATGAACGGCTGGATCGACATCACCGAACGGGAGCGCCTGGCCCGCCAGT TGCGCGAGGCGATGCGCCAGGCGGACGAGGCGAATCGGGCGAAGAGCGTCTTCCTGGCGACCATGAGCCACGAGATCCGTACGCCGATGAATGCGGTCAT CGGCATCCTCGAACTGGTCCTGCAGCGCCTGGCGCCGGAGCAGCGCGAACGCGCCTCGCTGGAGGTCGCCTACGAGGCTGCGGGGTCGCTGCAACTGCTC ATCGGCGACATCCTCGACGTCGCCAAGATCGAGTCCGGCCACCTGACCCTCACGCCCGAGCGGGTTCGCCTGCGCCATGTCGTGGAGTCGGTGCGCCGCA TGTTCGAAGGCCTGGCCCGGCAGAAGGGCGTGAGGCTCGTTGTGGAACTGGACGATGCCCCGGGACGGGACGTGCTGATCGATCCCCTGCGCTTCAAGCA GGTGCTCTCCAACCTGGTGAGCAATGCGATCAAGTTCACCGAGCGAGGACAGGTGACGATCCGTCTCCAGGAAAGGAGCCTGGACGAGGGGAGGGCGATC GTCCGGGTGGACGTGGAGGATTCCGGTATCGGTATCGCTCCGGCGGACCAGGCGCGCCTGTTCCAGCCTTTCATCCAGGTGGCCAAGGGACGCACGGTGC AGGGCGGGACCGGCCTTGGGCTGGCGATCTGTCGGAAGTTGGTGGACCTCATGGGCGGCGATGTCGAGATGCACAGCGAGCCGGGCAAAGGCACCCGGGT GTCGCTCGACCTGCTATTGCGCCAGTGCGGGCCGAAAATGCCTGAATCCGGCCAGGACCCGCTGGCAGCATCCATGGAGCCGTCTCGCCGCCTGCATATC CTCATCGCCGACGACTATCCGCCCAACCGGGTACTGCTGCGCCAGCAACTGGAGTTTCTCGGCCACCGGGTGGCGGAAGCGGAGGATGGCCAGGTGGCGC TGGAACTCTGGGCCGACGAGCGCTTCGAGGTGCTGATCAGCGACTGCAACATGCCGCGCCTGAACGGCTATCAGCTGGCACGCAGGATACGCATCCAGGA ACGGTGTGAGCGGCGCGCGCCGATCCTGATCCTCGGCTATACCGCCGACGCCGAGCCGGACGAGGTACAGCGCTGTCGCGACGCGGGCATGGATGATTGC CTGTTCAAGCCGCTCGGCCTGGAGACCCTGCGCAACTACCTCGCGACCTCTTTCGGCCGCGACGCCGCGCAGCCCCGGGGGCTCTATGACGCGGCCGCTC TCAGCAGCCTCGGCGGCGGCCGCCCGGAACGGCTGCGCGAACTGCTGGAGACCCTGCTAGGCAGCAACCGTCAGGACCTCCAGCGCCTTGCCATCCTCCT GCGCGAGGGCGACAGGGCCAGGCTCGCCGAGCATGCCCACCGCATCAAGGGCGCCGCGCGGATGATCGGGGCGCGTACCCTGCTGGAGGCCTGCGAGGCC CTGGAGGACGCCTGCCGGCGAGGTAGCGACGGGGAGTGCCTGCAGGCGCCTGGCGAAAGACTCCGGCTGGCTCTGGAGGCGTTGCAGGAGGAACTCCAGG AGCAGTTGGCGGCCGCTGCGGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCTTCCGTTCAGGAGGGGCTCGAGCGTCCGGTCATTTCCCGGGCCATTTCCGTGGCGTAGCTGTCGGTCATGCCGGCAATGAAATCGATCACCTGGAG AAAGGCGCGGTACAGCGGCCACTGCGGGTCGGGCGCGTTGCGTCCGAGCAGGTCGAGGATGCGCCGGTTCTTGAACGACGGCGTATGCCCGCCGTATTGC TCCAGCGCGGCGCCACAGAAGGCGTTGAGGAGGATCTCCAGAGTGGTGTAGGCGCCGATCTCGTGGAGGGTCTTGCGCTTGTCCTGGAAGATCTTTTCCC GCGCGATGGCCTTGGCCCGTTGCACGCAGAGCTTGGCCGGGCCGTGCATGTGTTCCACCAGGTCGCCGGCAAGCTGCCCGGCGAGCAGGGCCTGCTGCTG GTCGACGAAGGCACGGGCGGCGGCATTGGTCAGGTGCTCGATGGCCTTGCCGCGGAGGATCGCCAGCTTGCGCCGGCGGGAGTCCCTGGGGCCGAGTTGG
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Amino Acid Sequence |
>ATPase
MKFQKRSACMLGLLLVFACMAGYAVPARATAGEYASLLQIPAPDRPEGADAVVEVPLHQAADGLRSPSPSSLVLGLLVACLVCVGCLGWNTVLQLRLRRW QRTEADLSGRLALKQALVDGIPYPVSIRTLDGRLLACNRNYLESLRMTREQARGTLLTDSDWVEGSKARLMHQQCLAVARGGTASFTDMAVRIGGQLLEI HHWVTPYRDRQGRVLGLMNGWIDITERERLARQLREAMRQADEANRAKSVFLATMSHEIRTPMNAVIGILELVLQRLAPEQRERASLEVAYEAAGSLQLL IGDILDVAKIESGHLTLTPERVRLRHVVESVRRMFEGLARQKGVRLVVELDDAPGRDVLIDPLRFKQVLSNLVSNAIKFTERGQVTIRLQERSLDEGRAI VRVDVEDSGIGIAPADQARLFQPFIQVAKGRTVQGGTGLGLAICRKLVDLMGGDVEMHSEPGKGTRVSLDLLLRQCGPKMPESGQDPLAASMEPSRRLHI LIADDYPPNRVLLRQQLEFLGHRVAEAEDGQVALELWADERFEVLISDCNMPRLNGYQLARRIRIQERCERRAPILILGYTADAEPDEVQRCRDAGMDDC LFKPLGLETLRNYLATSFGRDAAQPRGLYDAAALSSLGGGRPERLRELLETLLGSNRQDLQRLAILLREGDRARLAEHAHRIKGAARMIGARTLLEACEA LEDACRRGSDGECLQAPGERLRLALEALQEELQEQLAAAAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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